Gene BMASAVP1_A1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A1188 
SymbolrecC 
ID4681599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp1166203 
End bp1170267 
Gene Length4065 bp 
Protein Length1354 aa 
Translation table11 
GC content74% 
IMG OID639845461 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_992523 
Protein GI121599679 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit
[TIGR02019] bacteriochlorophyll 4-vinyl reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.572849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGACGA GTCTATCGTA TTTCCGCGTC GCGAAAGCCG TGTTTCGGGG CCGGCGTTCG 
GCGTTCGGCG TTCGGCGTTC GGCGTTCGGC GTTCGGCGTT CGGCGTTCGG CGTTCGGCGT
TCGGCGTTCG GCGTTCGGCG TTCGGCGTTC GGCGTTCGGC GTTCGGCGTT CGGCGTTCGG
CGTTCGGCGT TCGGCGTTCG GCGTTCGGCG TTCGGCGTTC GGCGTTCGGC GTTCGGCGTT
CGGCGTTCGG CGTTCGGCGT TCGGCGTTCG GCGTTCGGCG TTCGGCGTTC GGCGTTCGGC
GTTCGGCGTT CGGCGTTCGG CGTTCGGCGT TCGGCGTTCG GCGTTCGGCG TTCGGCGTTC
GGCGTTCGGC GTTCGGCGTT CGGCGTTCGG ACTCAGACCG CCGTGCGCGC CGCCGGTTCA
GCGCGGCGAG CGGGCCTCGC GATTGCGGCG CATGGTGCCG TTCTCGCAGG CTGCCGAATG
ATGCGATGCG GCCGTTCGCC GAGGCCACGC GCGCAAGCGG CCGGGGCGGG CGTTGCCGTC
GCCGCGCGCG GCCCGTCGCA CGCGGCCCGG CCGCCGCAAC GAGCCGCGAG TCGCGACGGT
GGCCGCGAGA TCGCGGCGCG CGAGCGCCCG GCCGATCAGC CAGGTTCTCG CGCCCGTCAC
CCTTTGCTAT CCTTGGCTTC TCGACTGGCC GGGCTCCCCC GGCGTCCTTC ATCCGGTTTC
ATGCTCCATC TCTTCTACTC GAACCGCCAC GAAACGCTGG CCGACGCGTT GCTCGACGAT
CTCGCCTTCG CGTCGGACGG CGCGGGCCCC TGGGCCGCGC AGCAGGTGAT CGTGCCGAGC
GCGGCGCTGC GCCGGCGGCT CGAGCTCGAC CTCGCGAAGC GCCACGGCGT GTGCGCGAAC
GTGCGCTTCA GCTATCTCGC GCAATGGCTG TGGGCGCAGA TCGGCGAAGT GCTGACGGTG
CCCGCGCATT CGCCGTTCGC GCCCGATCGC CTGGTGTGGC GCTGCTACCG GCTGCTGTCG
GACCACGGCG CCGCGCCGTG GCGCGCATCG CCGCGGCTTG CCGCCTATCT GGCCGCGGCC
GACGCGCCGA TGCGCCACGA GCTCGCGCAC CGGATCGCGA CGGTGTTCGA CCACTATCTG
ACGTATCGTC CGGAGTGGCT CGCGCAATGG CAGGACGGCG AATCGATCTT CGCGCTCGAA
GGCGCGCCGC GCCACGGCGG CGAGGCCGCG CGCGACGACG AGGCGTGGCA GGCCGCGCTC
TGGCGCGCGC TGCTCGCGGA GCTGTCCGAC AGCGGCATGC CGCCCGCGCA CCGGTTCCTG
CGCGAGGCCC GCGCCTTCGA TCCCGATGTG ATCGCGCGCG CGCGGGCGAA GTGGCCGGAT
GCGGTCAGCG TGTTTGCGCT GCCGACGATG CCGCCGCTGC ACATCGCGCT GTTGCGCGAG
CTGTCGCGCT GGATCGACGT GCGCATCTAC GCGCTCAATC CGTGCCGTGA ATTCTGGTTC
GACATCGTCA CGGCCGCGCG CGCGGAGTCG CTCGACGCGG CGGACCGGCT CGACTATCAG
GAAGTCGGCC ATCCGCTGCT CGCCGAATGG GGCAGGCAGA CGCAAGCGCA ACTGCACATG
CTGCACGAGC TGACCGAGAG CGCGGCGGCG AGCGATGCGT CGCGCTACGC GGACAATCCC
GCGCCGACGT GGCTCGCGCG CGTGCAGAAC GCGATCCTCG ATCTGCAGCC GGAGGCCGCG
CTCGGCGAGC CGCCCGCCGA GCGCGGCGTC GAAGTGCACG TGTGCCACAG CCTCGCGCGG
CAGCTCGAGG TGCTGCATGA TCGCCTGCTC GCGTGGTTCG ACGCGGACCC GAGCCTCGCG
CCGTCGGACG TGCTCGTCGC GATGCCGGAT CTCGCGACGG CGGGGCCGCT CATCGACGCG
GTGTTCGGCA CGCCTGCGGG CGCCGACGCC GCGCGCATCC CGTACCGGAT CACCGGCCTG
CCGCCGTCGC AGGCGAATCC CGTCGCGCGC GTGCTGCTCG ATTGGCTCGC GTTGCCCGAG
CGCGACGTCG GCGCGCCAGA GCTCGTCGAA TGGCTGCGCG CCGACGCGGT CGCCGCGCGC
TACGGGATCG ACGCGACGGC GCTCGAAACC GTGCAGGCCT GGCTGGCCGC ATCGGGCGCG
CGGCGCGGGC TCGCGCCCGA TGCGGCCGAG CCGCCGAACC CGGCCGTGCC CGCGCCGCGC
CACACGTTCG CCGACGCGCT CACGCGGCTC TTTCTCGGCT ACGCGATGCC CGATGGCGCG
GCGCCCGTTT CGACGTGGCT GCCGATCGCG GGCGCCGAGG GCGGCGAAGC CGAGCTGCTC
GGCCGCCTCG CGCGCTTCAC CGACGACCTC GACGGTTTCG CGCGGCGCAT CGCCCGCGAC
CTCACGCCGC AAGGCTGGGG CGATGTATTC GCCGATGCGC TCGCGCGCTT CTTCGATTCG
GGGCCGGCGT TCGCAGACGC GCTGTCCGGC GTGCGCGACG CGCTCGACGC GATGCTTGCC
GCGATGGCGG AAGGCGCGGC GGGCGCGGCG TTGCCCGCCG CGGTCGTGCG CGCGGGCCTC
GCGGCCGCGC TCGACGATCC GGCGCGCGGC GGCGTGCCGT GGGGCGGCGT CACGTTCTCG
TCGCTCACGA GCCTGCGCGG GCTGCCGTAT CGCATCGTGT GCCTGATCGG GATGGACGAC
GGCGTGCTGC CGAGCCTCGC GCGCGCGGAC GAGTTCGACC TGATGGCCGT GTTCGCGAAG
CTCGGCGACC GCCAGCGGCG CGACGACGAG CGCAATCTGT TCCTCGATCT GCTGCTCGCC
GCGCGCGAGC GCCTGCTGAT CGCATACACG GGCCGCAGCA TCCGCGACAA CGCGCCGCTG
CCGCCCGCGG CGCTCGTCGA CGAATTGCTC GACCATCTGG CCGCCGCGTC GGCCGGCCCG
GACGCGCCGC CCGACGCGGT CGACGCCGCG CGCCGCGCGT TCGTGATCGA GCATCCGCTG
CAACCGTTCT CGGCCGAATA CTTCGCGCCG GGCGGCGCGC TCTTCACGTA CGACGCGTCG
CGCGCGACGC TTGCGCGCCT GCTCGCCGAG GGCGCGCGCG CGCAGGCGCG CCCGTTCTTC
GCCGCGCCGC TGCCGGCCGA GCCCGAGCAG CCGGTCGCGT TCGCCGATTT CGAGCGCTTC
TGGCGCCATC CGGCGCGTTC GCTGCTGCGC GCGCGGCTCG GCATCGTACT GTTGGACGCG
CAGGCGGAAC TCGTCGACAC CGAGCCGTTC GAGCTCGATT ACGCGGGCAG CGACGCGCTC
GCCGAGCGCG TGCTGCCGCT GTTGATCGAG ACGGCCGACG CGGCCGCGTT CGAGCATGCG
CTGCGCGTCG CCGACGCGAG CCCCGAGGTG CCGGGCGGCG CGACGGGCGC GGTGCGGCGC
GACCATGCGC TCGACGCGCT CGCGCAGCTC GCGGGCAACG TGCGGCGCGC GCTCGCCGAC
GGCGCGACGC GCGTGCCGTT CGCGTTCGAC GTCGCGCCCG CATGGTCCGC GGCGAGCGAC
GCGCGGTGGT TCGGCGAGCA CGACGCGGCG CTCGCCGCGG CGGCGACGCG CGAGCCGCTG
CGCCTGCACG GCGCGCTCGC GCGGCTGACG GCGGCGGGGC AGGTGATCTA CCGCTATGCG
CGGCCGGGGG CGCGCGATTA CCTCGCCGCG TGGCTCGCGC ATCTCGTCTA TTGCGCGATC
GACCCCGGCG GGCCGCGCCG CACACTATGG TTCGGCTCCG GCGACACGTT CGAATTCGCG
CCCGTCGCCG CGCCGCTCGA GCAGCTCGCG CCGCTCGCCG CGCTGTTTCG CGCCGGGCGG
CGGATGCCGC TCGCGTTTTT CCCGAGGAGC GCGTGGGCGC TCGTATCGGA GAGCGAATCG
AAGGCGGCGG GCGTGTGGAT CAACGATCGC GTCGCGGGCG AGGCCGACGA CGCGTCGCTC
GCGCTCGCGT GGCGCGGCGC GAACCCGTCG CTCGACGAGC CGTTCGGCGC GCTCGCGCAT
CTCGTGTTCG ATCCGCTCGT CGAGCATCTG CGGAGGGCGT CATGA
 
Protein sequence
MATSLSYFRV AKAVFRGRRS AFGVRRSAFG VRRSAFGVRR SAFGVRRSAF GVRRSAFGVR 
RSAFGVRRSA FGVRRSAFGV RRSAFGVRRS AFGVRRSAFG VRRSAFGVRR SAFGVRRSAF
GVRRSAFGVR TQTAVRAAGS ARRAGLAIAA HGAVLAGCRM MRCGRSPRPR AQAAGAGVAV
AARGPSHAAR PPQRAASRDG GREIAARERP ADQPGSRARH PLLSLASRLA GLPRRPSSGF
MLHLFYSNRH ETLADALLDD LAFASDGAGP WAAQQVIVPS AALRRRLELD LAKRHGVCAN
VRFSYLAQWL WAQIGEVLTV PAHSPFAPDR LVWRCYRLLS DHGAAPWRAS PRLAAYLAAA
DAPMRHELAH RIATVFDHYL TYRPEWLAQW QDGESIFALE GAPRHGGEAA RDDEAWQAAL
WRALLAELSD SGMPPAHRFL REARAFDPDV IARARAKWPD AVSVFALPTM PPLHIALLRE
LSRWIDVRIY ALNPCREFWF DIVTAARAES LDAADRLDYQ EVGHPLLAEW GRQTQAQLHM
LHELTESAAA SDASRYADNP APTWLARVQN AILDLQPEAA LGEPPAERGV EVHVCHSLAR
QLEVLHDRLL AWFDADPSLA PSDVLVAMPD LATAGPLIDA VFGTPAGADA ARIPYRITGL
PPSQANPVAR VLLDWLALPE RDVGAPELVE WLRADAVAAR YGIDATALET VQAWLAASGA
RRGLAPDAAE PPNPAVPAPR HTFADALTRL FLGYAMPDGA APVSTWLPIA GAEGGEAELL
GRLARFTDDL DGFARRIARD LTPQGWGDVF ADALARFFDS GPAFADALSG VRDALDAMLA
AMAEGAAGAA LPAAVVRAGL AAALDDPARG GVPWGGVTFS SLTSLRGLPY RIVCLIGMDD
GVLPSLARAD EFDLMAVFAK LGDRQRRDDE RNLFLDLLLA ARERLLIAYT GRSIRDNAPL
PPAALVDELL DHLAAASAGP DAPPDAVDAA RRAFVIEHPL QPFSAEYFAP GGALFTYDAS
RATLARLLAE GARAQARPFF AAPLPAEPEQ PVAFADFERF WRHPARSLLR ARLGIVLLDA
QAELVDTEPF ELDYAGSDAL AERVLPLLIE TADAAAFEHA LRVADASPEV PGGATGAVRR
DHALDALAQL AGNVRRALAD GATRVPFAFD VAPAWSAASD ARWFGEHDAA LAAAATREPL
RLHGALARLT AAGQVIYRYA RPGARDYLAA WLAHLVYCAI DPGGPRRTLW FGSGDTFEFA
PVAAPLEQLA PLAALFRAGR RMPLAFFPRS AWALVSESES KAAGVWINDR VAGEADDASL
ALAWRGANPS LDEPFGALAH LVFDPLVEHL RRAS