Gene BMASAVP1_A1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A1174 
Symbol 
ID4679690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand+ 
Start bp1154688 
End bp1155149 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content71% 
IMG OID639845447 
ProductRrf2 family protein 
Protein accessionYP_992509 
Protein GI121601481 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.246229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGA GCAGTCGGTT CGCGTTTGCC GTTCACGTGC TCGCGTTGCT GTCGCTGCAG 
GAAGGCGTGC CGCTGTCGTC GGAGGTGATC GCGGGCAGCG TGAACACGAA CCCGGCGCTG 
ATTCGCCGCC TGCTGTCGAT GCTGGCGGCG GCGGGGCTCA CGGCGTCGCA GCTCGGCGCG 
GGCGGCGGCG CGCTGCTCGC GCGCGAGCCG TCGCGCATCA CGCTGCTCGA CGTCTACCGC 
GCGGTGGACG ATGCGCAACT GTTCGCGCTG CACCGCGAGG CGCCGAATCC GGCCTGCCTC 
GTCGGGCGGC ACATCCAGGG CGTGCTGACC GATTACATCG GCGACGCGCA ACGGGCGATG 
GAGGCATCGC TTGCGACGCG CACGCTCGCC GACGTGACGG CCGACGTGTT GCGCTCGGAG 
GCTGCCGGTC AGCCGCCCCG GGGGCAACAA GCGGGTGGTT GA
 
Protein sequence
MNTSSRFAFA VHVLALLSLQ EGVPLSSEVI AGSVNTNPAL IRRLLSMLAA AGLTASQLGA 
GGGALLAREP SRITLLDVYR AVDDAQLFAL HREAPNPACL VGRHIQGVLT DYIGDAQRAM 
EASLATRTLA DVTADVLRSE AAGQPPRGQQ AGG