Gene BMASAVP1_A1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A1139 
SymbolnuoJ 
ID4680549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand+ 
Start bp1121109 
End bp1121765 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID639845413 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_992478 
Protein GI121601517 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.352541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTCA CGACCGTACT CTTCTACATC TTCTCGCTGC TCCTCGTGGT ATCGGGGCTG 
AAGGTGATCA CATCGCGCAA CCCGGTGGCG TCTGCGCTGT TCCTCGTGCT CGCGTTCTTC 
AACGCGGCCG CGATCTGGAT GCTGCTCGAG GCCGAGTTCC TCGCGATCCT GCTGGTGCTC 
GTCTACGTGG GCGCGGTGAT GGTGCTGTTC CTCTTCGTCG TGATGATGCT CGACGTCAAC 
ATCGACGTGC TGCGCCGCGA CTTCAAGCGC TTCGTGCCGA TGGCGACCGC GGTCGGCGCG 
ATCATCGTCG TCGAGACGGC GCTGATCCTC TGGCGCGGCT ACGGCGCGAC GGCTTCGCCC 
GTGCGCGACA TGGCCGCGGG CGCGCTCGCC GGCATGCCGA ACACGAAGCT GATCGGCAAG 
GTGATCTACA CCGATTACAT CTTCGCGTTC GAAATCGCGG GCCTCGTGCT GCTCGTCGCG 
ATCATCGCGG CGGTCGCGCT GACCGCGCAG AAGGGCAAGG ACAGCAAGCG CCAGCGCGTG 
TCCGAGCAGG TGAAGGTGCG CCGTGAGGAT CGCGTGCGTC TCGTGAAGAT GCCGGCCGAC 
AAGCCGCAGC CGGAAGCCGC GGCGAGCGAC GCCGCGTCGG GCTCGAACAA CGGCTAG
 
Protein sequence
MDFTTVLFYI FSLLLVVSGL KVITSRNPVA SALFLVLAFF NAAAIWMLLE AEFLAILLVL 
VYVGAVMVLF LFVVMMLDVN IDVLRRDFKR FVPMATAVGA IIVVETALIL WRGYGATASP 
VRDMAAGALA GMPNTKLIGK VIYTDYIFAF EIAGLVLLVA IIAAVALTAQ KGKDSKRQRV 
SEQVKVRRED RVRLVKMPAD KPQPEAAASD AASGSNNG