Gene BMASAVP1_A1116 details

Gene Information

• Locus tag: BMASAVP1_A1116
• Symbol: psd
• ID: 4679043
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 1098227
• End bp: 1098877
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639845390
• Product: phosphatidylserine decarboxylase
• Protein accession: YP_992456
• Protein GI: 121600161
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0688] Phosphatidylserine decarboxylase
• TIGRFAM ID: [TIGR00164] phosphatidylserine decarboxylase precursor-related protein

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTATC CTCATCCGAT CATCGCGCGC GAAGGCTGGC CGTTCATCGC AATCGCGGCC 
GTCGTCGCGC TGTTGATCCA CGCCGTCGGC GGGTTCGGCC TCGCATGGCC GTTCTGGCTG 
CTGCTCGTCT TCGTGGTCCA GTTCTTCCGC GATCCGCCGC GCGCCGTTCC GACGCAGGCG 
AACGCGGTGC TGTGTCCGGC CGACGGCCGT ATCGTCGCCG TCGAGACGGC GCACGATCCG 
TACGCGGATC GCGAAGCGCT GAAGATCAGC GTGTTCATGA ACGTGTTCAA TGTGCACTCG 
CAGCGCTCGC CCGTCGACGG CGCGGTGCAG AAGGTCGAGT ATTTTCCGGG CGCGTTCCTG 
AATGCCGCGC TCGACAAGGC GTCGGCCGAG AACGAGCGCA ACGCGGTCGT GATCCAGACG 
GGCGCGGGGC ATACCGTGAC GGCCGTGCAG ATCGCGGGCC TCGTCGCGCG CCGGATTCTC 
TGCTACGTGC GCGCGGGCGA GCCGCTGTCG CGCGGGCAGC GCTACGGTTT CATCCGCTTC 
GGCTCGCGCG TCGACGTTTA TTTGCCGAAG GGCAGCCGAG CACGCGTGTC GATCGGCGAG 
AAGGTGTCTG CATCGTCGAC GATCCTCGCC GAGCTGCCCG AACAACCGTA A 

 

Protein sequence

MNYPHPIIAR EGWPFIAIAA VVALLIHAVG GFGLAWPFWL LLVFVVQFFR DPPRAVPTQA 
NAVLCPADGR IVAVETAHDP YADREALKIS VFMNVFNVHS QRSPVDGAVQ KVEYFPGAFL 
NAALDKASAE NERNAVVIQT GAGHTVTAVQ IAGLVARRIL CYVRAGEPLS RGQRYGFIRF 
GSRVDVYLPK GSRARVSIGE KVSASSTILA ELPEQP