| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1093 |
|---|
| Symbol | |
|---|
| ID | 4679984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 1075542 |
|---|
| End bp | 1077251 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639845367 |
|---|
| Product | ABC lysophospholipase exporter, fused innermembrane subunits, FtsX |
|---|
| Protein accession | YP_992433 |
|---|
| Protein GI | 121599529 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCGCGC TGCTCGCGGC CGTCGCGATC GCGATGGCCG CGCAGCGCTA CATGCGCCGC
CATCTCGACG GCTGCGCGGC GATGCGCTGC CTCGGCGCGA GCCGGCGCAC GCTGTCGGCG
CTGTTCGCGA TCGAATTCGC GCTGCTCGGG CTCGCGGGCG GCGCGGCGGG CGCGGCGCTC
GGCTACGTCG GCCATCTCGT GCTGCTGCGC GCGCTCGGCA GCCTGATCGA CGTCGTGCTG
CCGCCGCCTT CGGCATGGCC GGCGGCGATC GGCGTCGGAA CCGGGCTCGT GCTGCTGCTC
GGCTTCGCGC TGCCGCCGCT CGCGCCGTTG ACGCGCGTGC CGCCGGTGCG CGTGCTGCGC
CGCGAATGGG GCGACGCCGG CCGCGTCGCG TGGGTCGGCT ACGCGATGGG CATCGCGCTC
TTCGCGGCGC TGTTGATCGC GGCGGCGGGC AACCTGACGC TCGGCGCGAT CGTCGCGGGC
GGCTTCGCGG GCAGCCTCGT GCTGTTCGCG CTCATCGCGC GGCTCGCGCT CGTCGCGCTC
GCGCGGCTCG TGCGCGACGG CCGCGTCGCG GCGGGGCTCG GCTGGCGCCA CGCGCTCGCG
TCGCTCGAGC GGCGCGGCGC GGCGAGCGCG CTGCAGATCA CCGCGCTCGC GCTCGGTCTG
ATGTGCCTGC TGCTCATCGC GATCACGCGC AACGATCTCG TCGCCGGCTG GCGGCAGTCG
ACGCCGCCCG ACGCGCCGAA CCAGTTCCTG ATCGACATCC AGCCCGACCA GCGCGACGAC
GTCGTCCGCT ATCTCGCGGC GAACGGCATC GCCGATCCGG CGCTGTCGCC GATGGTGCGC
GGGCGGCTCG TCGCGGTGAA CGGCAAGCCG GTGAATCCGG ACGACTACAA GCGCGACGAC
GCGCGCCGCC TCGTCGATCG CGAGTTCAAC CTCTCGTACA CGACACGGCT GCCCGAGGAC
AACCGGCTCG TCGCGGGCGA CTGGTTCGGC GCGTCGGGCG TGCCGCAGAT CTCGATCGAG
GCGGGGCTCG CGAAGACGCT GGGCGTGAAA ACGGGCGACA CGCTGCGTTT CGACGTGACG
GGCCTCACCG TCGACGCGCC GGTGACGAGC GTGCGCAAGC TCGATTGGGG CACGTTCCGC
GTGAACTTCT TCGTGCTGAT GCCGCCCGCG GCGCTGCGCG ATTTTCCGGC CACCTACATC
ACGAGCTTCC ATTTGCCCGC CGCGCGCGAG CGCGTGCTCG ACGGCCTGAT CGCACGCTAC
CCGAACCTGA CGGCGATCGA CGTCGGCCCG ATCCTCGCGC AGCTCGAGCG CGTGCTGCTG
CAGGTGATCG GCGCGGTGCA GTTCCTGTTC GGCTTCACGC TCGCGGCGGG TGTGCTCGTG
CTGTATACGG CGCTCGCCGG CTCGCGCGAC GAGCGCGTGC GCGAGGCCGC GCTGATGCGC
GCGCTCGGCG CGTCGCGCAA GCAGGTCGTC GCCGTGCAGC GCGCGGAGTT CGTCGTCGTC
GGCGTGCTCG CGGGCGCGAT GGCGGCGGCG GGCGCGCTTG TGGTCGGCGC GGTGCTCGCG
TCGCGCGTGT TCGATTTCCA GCTCGCGCCC GACCCGTGGC TCGTACCGGC CGGCATCGCG
GCGGGCGTCG CGTGCGCGGG CGCGGCGGGG TGGCTCGGCC TGCGCGGCGT GCTGCGCCGG
CCGGCGCTGC AATCGCTGCG CGATGCATGA
|
|---|
| Protein sequence | MTALLAAVAI AMAAQRYMRR HLDGCAAMRC LGASRRTLSA LFAIEFALLG LAGGAAGAAL
GYVGHLVLLR ALGSLIDVVL PPPSAWPAAI GVGTGLVLLL GFALPPLAPL TRVPPVRVLR
REWGDAGRVA WVGYAMGIAL FAALLIAAAG NLTLGAIVAG GFAGSLVLFA LIARLALVAL
ARLVRDGRVA AGLGWRHALA SLERRGAASA LQITALALGL MCLLLIAITR NDLVAGWRQS
TPPDAPNQFL IDIQPDQRDD VVRYLAANGI ADPALSPMVR GRLVAVNGKP VNPDDYKRDD
ARRLVDREFN LSYTTRLPED NRLVAGDWFG ASGVPQISIE AGLAKTLGVK TGDTLRFDVT
GLTVDAPVTS VRKLDWGTFR VNFFVLMPPA ALRDFPATYI TSFHLPAARE RVLDGLIARY
PNLTAIDVGP ILAQLERVLL QVIGAVQFLF GFTLAAGVLV LYTALAGSRD ERVREAALMR
ALGASRKQVV AVQRAEFVVV GVLAGAMAAA GALVVGAVLA SRVFDFQLAP DPWLVPAGIA
AGVACAGAAG WLGLRGVLRR PALQSLRDA
|
|---|
| |