Gene BMASAVP1_A1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A1058 
Symbol 
ID4681353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp1043872 
End bp1044765 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content70% 
IMG OID639845332 
ProductRNA polymerase sigma-70 factor 
Protein accessionYP_992398 
Protein GI121599726 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAA CCTCCCGTCC GGCGCCGTCC GACGAACCGT TCGCCGCGCT GCGCCCGCGC 
CTTTTCTCGA TCGCATACCG GATGCTCGGC ACGCGCGCCG ATGCCGAAGA CGTGCTGCAG
GACGCCTGGC TGCGCTGGCA CCAGGCCGAA CGCGACACGC TCGATTCGCC CGAGGCATGG
CTCGTCACGG TCGTCACCCG GCTGTCGATC GATCGGCTAC GCGCCGCGAA GGCGCAGCGC
GACGCCTATG TCGGATGGTG GCTCCCCGAG CCGCTCGTCG ACATCGACGA GCGCACGCCC
GAGGCCGCGG CCGAGTTCGC CGACGACCTG TCGGTGGCGC TACTGTGGGT GCTCGAACGG
CTCTCGCCCG AGGAACGCGC GGCATTCCTG CTGCGCCAGG CGTTCGAGCG CGACTACGCG
GAAATCGCGC AACTGCTCGA CAAGAGCGAA GCGGCCTGCC GCCAGCTCGT CCACCGCGCG
TCGACGCGCG TGCAGCAGGA ACACCGGCGC TTCGACGTAT CGCGCGAGCG CCACCGGCAA
CTCGTCGAGC GCTTCGCGCG CGCCGCGGCA AGCGGCGAGC GCAACGCGAT CCGGGCGCTG
CTCGCCGACG ACGTGGAACT GGTCGGCGAC GGCGGCGGCA AGGTGCCGTC GTTCTTCAAG
GTGCTGCGCG GCGCGCTCCG GATCGCGAAT CTGTATTGGG CCGTCGGCCG ACGCCATGCC
GGGCAGATCG AATACCGGCT CGCGCAAATC AACGGCGAAC CGGGCCTGCT GCGCTTCATC
GACGGACGGA TCGAATCGGC ACAGGCGTTC GCCACCGACG GCGCGCGGAT CGTCGCGATC
TACGCGGTGC GCAATCCGGA CAAGCTCGCG CATATTCCGA ACCGCCCGGC GTGA
 
Protein sequence
MTETSRPAPS DEPFAALRPR LFSIAYRMLG TRADAEDVLQ DAWLRWHQAE RDTLDSPEAW 
LVTVVTRLSI DRLRAAKAQR DAYVGWWLPE PLVDIDERTP EAAAEFADDL SVALLWVLER
LSPEERAAFL LRQAFERDYA EIAQLLDKSE AACRQLVHRA STRVQQEHRR FDVSRERHRQ
LVERFARAAA SGERNAIRAL LADDVELVGD GGGKVPSFFK VLRGALRIAN LYWAVGRRHA
GQIEYRLAQI NGEPGLLRFI DGRIESAQAF ATDGARIVAI YAVRNPDKLA HIPNRPA