Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1028 |
Symbol | |
ID | 4679067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1007998 |
End bp | 1009830 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639845302 |
Product | glycosy hydrolase family protein |
Protein accession | YP_992368 |
Protein GI | 121600329 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.111338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGCCC TCATCGAAGA CTACGCTCTC GTCGGCGACG GCCACACGGC CGCGCTGATT TCCCGCGACG GCTCGGTCGA CTGGCTGTGC TGGCCCCGTT TCGATTCGGG CGCGTGCTTC GCCGCGCTCG TCGGCACGCC CGAGCACGGC CGCTGGCTCG TCGCGCCCGC GGACGACGTG CGCGTGAGCG CGACGTCGCG CCGCTACCGC GGCGACACGC TGATCCTCGA AACCGACTAC GAGTGCGACG AAGGCGCCGT CACCGTGATC GATTTCATGC CGCCCGGCAG CGGCTGGTCC GAGCTCGTGC GCATCGTCGT CGGCCGGCGC GGCGAGATGC GCATGCAGAT GCAGCTCGTG TTGCGCTTCG ACTACGGCTT CTCGGTGCCG TGGGTCACGC GGCTGCCGCG CGAGGCGGGC GTGAAGGCGA TCGCCGGCCC GGACACGGTC GTGCTGCGCA CGCCCGTGCC GCTTTCGGGC GAGAACCTGC ATACGGTGGC CGAATTCACG GTGAAGGCGG AGGAGCGCGT GCCGTTCTCG CTGTCGTACG CGCCGTCGCA TCTGCGGCTG CCGCCCGCGC GCGAGCCGCT GTCGATGCTC GCGCGCACCG AGAACTACTG GCTCGAATGG TCGGCGCGAT GCCCGCTGCG CGGCCGCTAC GCGAGCGCCG TGCGACGCTC GCTGATCACG CTGAAGGCGC TCGCGTACGA GCCGACGGGC GGCATCGTCG CCGCGCCGAC GACCTCGCTG CCCGAGCAGT TGGGCGGCAC CCGCAACTGG GACTACCGCT ATTGCTGGCT GCGCGACGCG ACGATCACGC TGCTCGCGTT GATGCGCGGC GGCTACTACG ACGAGGCGCG CGCGTGGCGT ACGTGGCTCG GCCGCGTGAT GGCGGGCTCG CCCGAGCAGA TTCAGATCAT GTACGGGATC GCGGGCGAGC GGCGCCTGCC CGAAATGGAG CTCGACTGGC TGCCGGGCTA CCAGGATTCG CGGCCGGTGC GCATCGGCAA CAACGCGGCG AACCAGTTGC AGCTCGACGT GTTCGGCGAG GTGATGTCCG CGCTGCACAT CGCGCGCGTG GGCGGGCTGC AGGCGGACGA CACGGTGTGG TCGGTCCAGA CGACGCTGCT CGCGCACCTC GAGAAGATCT GGCGCGAGCC GGACGAAGGC ATCTGGGAGA CGCGCGGCGG CCGCCGGCAT TTCACGTTCT CGAAAGTGAT GGCGTGGGTC GCGTTCGACC GCGCGATCAA GTCGGCCGAG ATGTTCCGCC TGTCCGCGCC GCTCGAGCGC TGGCGCGCGA TCCGCGACGA GATCCACGCG GACGTTTGCG CGAACGGCTG GAACCCGCGG GTGCGCGCAT TCACGCAGAG CTATGGCAGC GACGCGCTCG ACGCGAGCGT GCTGATGCTG CCGCTCGTCG GTTTCCTGCC GCCCGACGAT CCGCGCATCG CGGACACCGT CGAGGCGATC GAGCGCGGCC TGATGCGCGA CGGCCTCGTG CTGCGCTACC ACACGACCGA ATACGACGAC GGCCTGCCGC CCGGCGAAGG CACGTTCCTC GCGTGCAGCT TCTGGCTCGT CGACAATCTC GCGCTGCTCG GCCGCATCGA CGACGCGCAC GCGCTCTTTC GCCGCCTGCT GTCGCTCACG AACGATCTCG GCTTGCTCGC CGAGGAATAC GATCCCGTGA CGCGCCGCCA GGTAGGGAAT TTCCCGCAGG CGTTCTCGCA TGTCGGGCTC GTGCACACCG CGTTCAACCT GATGCATCAC GAAGAGGAAA TGCTGCGCGC GGCCGGCCAG CCTGCCGCGG CGGACGCCGT CGCCGGGCGC TAG
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Protein sequence | MPALIEDYAL VGDGHTAALI SRDGSVDWLC WPRFDSGACF AALVGTPEHG RWLVAPADDV RVSATSRRYR GDTLILETDY ECDEGAVTVI DFMPPGSGWS ELVRIVVGRR GEMRMQMQLV LRFDYGFSVP WVTRLPREAG VKAIAGPDTV VLRTPVPLSG ENLHTVAEFT VKAEERVPFS LSYAPSHLRL PPAREPLSML ARTENYWLEW SARCPLRGRY ASAVRRSLIT LKALAYEPTG GIVAAPTTSL PEQLGGTRNW DYRYCWLRDA TITLLALMRG GYYDEARAWR TWLGRVMAGS PEQIQIMYGI AGERRLPEME LDWLPGYQDS RPVRIGNNAA NQLQLDVFGE VMSALHIARV GGLQADDTVW SVQTTLLAHL EKIWREPDEG IWETRGGRRH FTFSKVMAWV AFDRAIKSAE MFRLSAPLER WRAIRDEIHA DVCANGWNPR VRAFTQSYGS DALDASVLML PLVGFLPPDD PRIADTVEAI ERGLMRDGLV LRYHTTEYDD GLPPGEGTFL ACSFWLVDNL ALLGRIDDAH ALFRRLLSLT NDLGLLAEEY DPVTRRQVGN FPQAFSHVGL VHTAFNLMHH EEEMLRAAGQ PAAADAVAGR
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