Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1006 |
Symbol | |
ID | 4681081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 988695 |
End bp | 989297 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639845280 |
Product | chorismate lyase family protein |
Protein accession | YP_992346 |
Protein GI | 121600148 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.998133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGGA TGCGTTTCGA CGCCGCCGAT GCGCACTGGC GCGAGACGCC GCGCCCCGGC GCGTCGAGCG CGCAGAAGGA CTGGCTCACG CGCGGCGGCT CGCTCACCGC GCACCTCGCG CGGCTCGGCC GCGTGACGGT GCGCGTGACG CGCGAGACGG TCGCGGCGCC GTGGGCCGAC GAGCACCGCG CGCTTTCCTG CGCGTCGCGC GCGCCGGTGT GGGTGCGCGA GGTCGTGCTC GCGGTCGACG GCGCGCCGTT CGTCGCCGCG CACAGCATCG CGCCGCTCGC CGCGAGCAAG GGCGTGTGGC AGGCGATGCG GCGGCTGCGC ACGCGCCCGC TCGCCGAGCT GCTCTATAGC GATCCGGAAG TGACGCGCTC GGCGCTCGTG AGCCGGCGCG TGCTCGCCGG GCATCCGTTG TTCTCGCTCG CATCGCTCGC GCTCGCGCGC GCGTATGCGA CGGAGCACGC GTTCGCCGCC CGCCGCTCGG TGTTCGAGCG GCGCGGCACG CCGCTGATGG TGACCGAATG CATGCTGCCC GCGCTGTGGC GGCATCTCGA CGCACACGGC GAGCGCCGCG CGCGCGGCCT CGAGCAGACG TGA
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Protein sequence | MARMRFDAAD AHWRETPRPG ASSAQKDWLT RGGSLTAHLA RLGRVTVRVT RETVAAPWAD EHRALSCASR APVWVREVVL AVDGAPFVAA HSIAPLAASK GVWQAMRRLR TRPLAELLYS DPEVTRSALV SRRVLAGHPL FSLASLALAR AYATEHAFAA RRSVFERRGT PLMVTECMLP ALWRHLDAHG ERRARGLEQT
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