| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1004 |
|---|
| Symbol | |
|---|
| ID | 4679806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 985207 |
|---|
| End bp | 986661 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639845278 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_992344 |
|---|
| Protein GI | 121599547 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.315502 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCG TCCCGCTTGC GCAGATCCCC GCGCCGCACG ATACCGCGAC GCTCACGCTC
GTCGATCAGC TCGTGCAATG GGCGCGCCGC CGGATCGACG AGCGCGTGTT CCGGCCCGGC
ATGCGGATGC CGTCGATCCG CAAGCTCGCG CTCGACAAGA GCGTGTCGCG CTTCACGGTC
GTCGAGGCGT ACGAGCGGCT CGTCGCGCAG GGCTATCTCG ATTCGCGGCG CGGCTCCGGC
TTCTACGTGC GCGAGCGCGC GCCCGGGCAG CAGCCGGTGG GCGCATCGGG CGGCGCGCGC
GCGCAGCCCG TGCACAACAC GATCGACGTC GTCTGGCTGC TGCGCAACAT GCTGCACACG
GTCAGCCCGG AAAAGGGGCC GGGGCTCGGC TATCTGCCGA GCCGCTGGCT CGACGGCGAA
CTGATCACGA GCGCGTTGCG CGCGCTCGGC CGGCAATCGG GCGCGCAGAT GCTCGGCTTC
GGCAGCGCGC AGGGCTTCCT GCCGCTGCGG CAGCAACTGC AGACGCGCCT CGCCGAATTC
GAGATCGGCG CGACGCCCGA TCAGCTCGTG CTCGTGTCCG GCATCACGCA GGCGATCGAT
CTGATCGCGC GCCACTGCGT GCGCCCGGGC GACGCGGTGA TCGTCGGCGA TCCGGCCTGG
TTCCAGATGT TCGGGCGCTT CGCGTCGCAG GGCGCGCAGC TCGTCGGGAT GCCGTACACG
CCGGACGGCC CCGATCTCGA CGCGCTCGAG AACCTCGTGC AGATGTGGCG CCCGAAGATG
CTCGTGATCA ACTCGGTGCT GCACAATCCG ACGGGCACGT CGCTGTCGGC CGCGCAGGCG
TTCCGGATCC TGAAGCTCGC GGAGGCGTAC GATTTCCTCG TCGTCGAGGA CGACGTCTAC
GGCGACCTGT GCCCGCCGAG CTATCCGGCG ACGCGCCTGG CGAGCCTCGA CCAGTTAAGG
CGCGTGATCT TCCTCGGCAG CTTCTCGAAG ACGCTCGCCG CGAACCTGCG GGTCGGCTAC
ATCGCGTGCG CGCCGGAACT CGCGAAGGCG CTGACGGATC AGAAAATGCT CGTCGGGATG
ACGACGCCCG AGCTCAACGA GCGCGTGCTG TACAAGGTGC TCACGGAAGG GCACTACCGG
CGCCACGTCG AGCGGTTGCG CGCGCGGCTC GACGGCGTGC GCGACAAGAC CGCGCGGATG
CTCGAGCGCA CCGGCATGCG GCTCTTCACG ATGCCGGCGG CGGGGATGTT CCTGTGGGCC
GACACGGGCG TCGATTCGGA CGCGCTCGCC GCGGCCGCGC ACGAGGAAGG TTTCCTGCTC
ACGCCGGGGA GCCTCTTCTC GCCGCAGCAG TCGCCTTCGA CGTGGACGCG CTTTAACGTC
GCGAACTGCG GCGATCCGGC GCTGCCCGCG TTCCTCGGCC GCTATCTCGA CAGCGTGAAC
CGCCGCGCCT CTTGA
|
|---|
| Protein sequence | MSTVPLAQIP APHDTATLTL VDQLVQWARR RIDERVFRPG MRMPSIRKLA LDKSVSRFTV
VEAYERLVAQ GYLDSRRGSG FYVRERAPGQ QPVGASGGAR AQPVHNTIDV VWLLRNMLHT
VSPEKGPGLG YLPSRWLDGE LITSALRALG RQSGAQMLGF GSAQGFLPLR QQLQTRLAEF
EIGATPDQLV LVSGITQAID LIARHCVRPG DAVIVGDPAW FQMFGRFASQ GAQLVGMPYT
PDGPDLDALE NLVQMWRPKM LVINSVLHNP TGTSLSAAQA FRILKLAEAY DFLVVEDDVY
GDLCPPSYPA TRLASLDQLR RVIFLGSFSK TLAANLRVGY IACAPELAKA LTDQKMLVGM
TTPELNERVL YKVLTEGHYR RHVERLRARL DGVRDKTARM LERTGMRLFT MPAAGMFLWA
DTGVDSDALA AAAHEEGFLL TPGSLFSPQQ SPSTWTRFNV ANCGDPALPA FLGRYLDSVN
RRAS
|
|---|
| |