| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0988 |
|---|
| Symbol | hisJ |
|---|
| ID | 4678889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 971794 |
|---|
| End bp | 972570 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639845262 |
|---|
| Product | histidine ABC transporter, periplasmic histidine-binding protein |
|---|
| Protein accession | YP_992328 |
|---|
| Protein GI | 121601374 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.310906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TCGCCCTGTG CGCGGCCCTC GCCCTTGCGG CGGGCGGCGC CTTCGCGAAG
GAATGGAAGA CCGTGCGGAT CGGCGTCGAC GCCAGCTATC CGCCGTTCGA ATCGACCGCG
CCGAGCGGCG AGATCGTCGG ATTCGACGTC GATCTCGCGA AGGAAGTCTG CAAGCGGATC
AACGCGAAGT GCACATGGAC GCCGCAGGAT CTCGACGGCA TCATCCCCGC GCTGAAGGCG
AAGAAGTTCG ACGTGATCGT GTCGTCGCTG ACCGTCACCG ACAAGCGCCG CGAGCAGATC
GATTTCTCCG ACAAGCTGTA CGACGCGCCC GCGCGAATGA TCGCGAAGGC GGGCTCGCCG
CTCGCGCCGA GCGTCGAGTC GCTCAAGGGC AAGCGCGTCG GCGTCGAGCA GGGCTCGACC
CAGGAAACCT TCGCGAAGGC GCACTGGGAG CCGAAGGGCG TGACGATCGT GTCGTACCAG
AACCAGGATC AGGTGTATGC CGATCTCGGC TCGGGGCGCC TCGATGCGAC GCTGCAAGAC
GAGTTGCAGG CCGACTACGG CTTCCTGCGC ACGCCGCGCG GCAAGGGCTT CGCCTGGGCA
GGTCCGGCCG TGAAGGATCC GCGCACGCTC GGCGACGGCA CCGCGATGGG CCTGCGCAAG
GAAGACGCGG ACCTGAAGGA CGCGATCAAC CGCGCGCTCG CTTCGATGCA CAAGGACGGC
ACGTACGACA GGCTCTCGCG CAAGTACTTC CCGTACAGCG TGTATTCGGC GAAGTAA
|
|---|
| Protein sequence | MKKLALCAAL ALAAGGAFAK EWKTVRIGVD ASYPPFESTA PSGEIVGFDV DLAKEVCKRI
NAKCTWTPQD LDGIIPALKA KKFDVIVSSL TVTDKRREQI DFSDKLYDAP ARMIAKAGSP
LAPSVESLKG KRVGVEQGST QETFAKAHWE PKGVTIVSYQ NQDQVYADLG SGRLDATLQD
ELQADYGFLR TPRGKGFAWA GPAVKDPRTL GDGTAMGLRK EDADLKDAIN RALASMHKDG
TYDRLSRKYF PYSVYSAK
|
|---|
| |