| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0943 |
|---|
| Symbol | |
|---|
| ID | 4681439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 939575 |
|---|
| End bp | 940291 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639845217 |
|---|
| Product | hydrophobic amino acid ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_992283 |
|---|
| Protein GI | 121598190 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00876691 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCGG CAATGTTGAA GATCAAGGGC TTGCAGGTCA ACTACGGCGG CATCCAGGCC
GTCAAGGGCG TTGACATGGA AGTCCGTCAG GGCGAGCTCG TCACGCTGAT CGGCGCGAAC
GGCGCGGGCA AGACCACGAC GATGAAGGCG ATCACGGGCC TGAAGCCGTA CTCGGCGGGC
GACATCGAGT ACGACGGCCA GTCGATCAAG GGCGTGCCGC CGCACGAGCT GCTCAAGCGC
GGCCTCGCGA TGGTGCCGGA AGGCCGCGGG ATCTTCGCGC GGATGTCGAT CATCGAGAAC
ATGCAGATGG GCGCGTATCT GCGCAACGAC AACGAGCAGA TCAAGAAGGA CGTCGAGCGG
ATGTTCGGCT TCTTCCCGCG CTTGAAGGAG CGGGCGACGC AGCTCGCGGG CACGCTGTCG
GGCGGCGAGC AGCAGATGCT CGCGATGTCG CGTGCGATTC TGTCGAAGCC GAAGCTGCTG
CTGCTCGACG AGCCGTCGAT GGGCCTGTCG CCGATCATGG TCGAGAAGAT TTTCGAAGTG
GTGCGCGAGA TCTCGAAGGA GGGGATCACG GTGCTGCTCG TCGAGCAGAA CGCACGCCTC
GCGCTGCAGG CGGCCGACCG CGGCTACGTG ATGGATTCGG GCACGGTCAC GATGGAAGGC
GACGCGAAGC AGATGCTCGA CGATCCGAAG GTGCGCGCCG CGTACCTCGG CGAGTAA
|
|---|
| Protein sequence | MAAAMLKIKG LQVNYGGIQA VKGVDMEVRQ GELVTLIGAN GAGKTTTMKA ITGLKPYSAG
DIEYDGQSIK GVPPHELLKR GLAMVPEGRG IFARMSIIEN MQMGAYLRND NEQIKKDVER
MFGFFPRLKE RATQLAGTLS GGEQQMLAMS RAILSKPKLL LLDEPSMGLS PIMVEKIFEV
VREISKEGIT VLLVEQNARL ALQAADRGYV MDSGTVTMEG DAKQMLDDPK VRAAYLGE
|
|---|
| |