Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0935 |
Symbol | |
ID | 4679229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 931375 |
End bp | 932340 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639845209 |
Product | NAD-dependent epimerase/dehydratase family protein |
Protein accession | YP_992275 |
Protein GI | 121600752 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.109062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGGG TCATCGTTAC GGGCGCGAAC GGGTTCGTCG GGCGCGCGCT CTGCCGCGCG CTGCTCGCGG CCGGGCACGA GGTTACGGGG CTCGTGCGCC GCCGGGGTGT TTGCGCCGAA GGCGTGTCGG AGTGGGTGCA CGAGGCTGAT GATTTCGATG GTGTCGCCGA CCGTTGGCCT GCGGGTCTGC AGGTGGATGC CGTCGTGCAT CTCGCCGCCC GCGTTCATAT GATGCGTGAC CGCTCGCCCG ATCCGGACGC TGCGTTTCGT GCATCGAACG TTGCGGCGAC GATGCGCGTG GCTCGTGCTG CACAGCAGCA AGGCGCAAGA CGGTTCGTGT TTCTGAGCAG CGTCAAAGCG ATTGCTGAAT CCGACGGCGG CACGCCGCTG TGCGAGAATT CGACGCCGGC GCCGCAGGAC GCTTACGGAC GCTCGAAGCT CGAAGCCGAA CGTGCGCTTG AACAATTGCG CGACGAACTG AGCTTCGACA CGGTCATCGT CAGGCCGCCG CTCGTGTATG GCCCGGGGGT TCGCGCCAAT TTCCTGAGCC TGATGCGTGC GGTATCACGA GGCGTGCCGC TGCCGCTGGG AGCGGTGCGC GCGCGACGCA GTATGGTGTA CGTCGACAAT CTCGCCGACG CGGTGATGCG CTGCGTGACG GAACCAGCGG CCACGAACGG GTGCTTTCAT GTCGCGGATA GTGATATGCC GCCGACCATT GCCGAATTGC TCGATGACAT CGGGCATCAT CTTGGACGCC CCGCACGTCT GTTGCCCGTG CCGGAGCGTT TGCTGCGCGT CGCGGGGGCG TTGACGGGGC GCGCGGCGCA GATCGATCGT CTGACGAGCG ACCTGCGGCT CGACACGACG CACATTCGCA CGGTGCTCGA CTGGCGTCCG CCGCGCTCGA GCGAAGAGGG GCTCGCCGAA ACGGCGTGCT GGTTCAAGTC GCTGGGCCGA CGCTAG
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Protein sequence | MSRVIVTGAN GFVGRALCRA LLAAGHEVTG LVRRRGVCAE GVSEWVHEAD DFDGVADRWP AGLQVDAVVH LAARVHMMRD RSPDPDAAFR ASNVAATMRV ARAAQQQGAR RFVFLSSVKA IAESDGGTPL CENSTPAPQD AYGRSKLEAE RALEQLRDEL SFDTVIVRPP LVYGPGVRAN FLSLMRAVSR GVPLPLGAVR ARRSMVYVDN LADAVMRCVT EPAATNGCFH VADSDMPPTI AELLDDIGHH LGRPARLLPV PERLLRVAGA LTGRAAQIDR LTSDLRLDTT HIRTVLDWRP PRSSEEGLAE TACWFKSLGR R
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