Gene BMASAVP1_A0933 details

Gene Information

• Locus tag: BMASAVP1_A0933
• ID: 4680233
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 928602
• End bp: 930473
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 639845207
• Product: putative glycosyl transferase
• Protein accession: YP_992273
• Protein GI: 121598235
• COG category: [M] Cell wall/membrane/envelope biogenesis; [R] General function prediction only
• COG ID: [COG0463] Glycosyltransferases involved in cell wall biogenesis; [COG1216] Predicted glycosyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.61745
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCGTGTG TCACGAAGGC AGGAATAGAG ATGCGGTTTG ATATATCCGT CGTGGTGTAT 
CGAGAGACGG AGGAAACCCT CGACGATCTT CTCGACAGCC TCGCCGCTCA AGCATCATGC 
CCGGATACGG TGGTTCGTGT CTGGTTGCGC AACAACGATC CCGCCGATGC CGATCGGTGG 
GATCGGTTCG TGCACGATCG GTCATGGTAT CCATTCGAAA TTTCGATCTC GCATTCTCCG 
CAGAACGTGG GCTTCGGGCG CGCGCACAAT GCGACGTTCG AAATGGCCGA CGCCCCGTTT 
TTCTTTGTCT TGAATCCGGA TACTCGACTG CATTCGACTG CCGTCTCGGC ATTGCGGAAG 
GCGATAGACA CGTCTGCCGG CGACGTGGGC GCCTGGGAGT TGCGGCAACT GCCGTACGAG 
CATCCGAAAC TGTACGATCC CGTTTCGCTC AGCACGGACT GGGTGACAGG TGCCGCCGTC 
GTGTTCCGGC GTGCCGCGTT TGCGCAGGTG CGCGGTTTCG AGCCGCGTAT CTTCATGTAT 
GGGGAAGATG TCGACCTATC GTGGCGAATG CGCGCCGCGG GCTGGGTATT GCATTATGTG 
CCGCATGCTG TCGTCGTACA CCCCACGTAT TCGAAACCGA TGGAGGCCAA ACCGCTCCAG 
ATCGCAGGCG GCGTGGTCGC ATCGTTGCAA TTGCGTACGA GGTTCGGGTC CTGGCTCGAT 
ATCGCTCGCG GTCTAGGTTG CTGGGTTGCC GAACTCGCGA GGCCGGCGCG CTTCCCGCAT 
GCGCGGCGCA CGCATCTGAT GGCACTGGCT CGATATCTTC GGAGCGCAGC CTACTTCAGG 
CGCACGGGGG CACGGTATCG CAAAGGCGGT TTTCGCCCCG GTTTTCGTTT TTGGGGATAT 
GGTGACCGAC GCGACGGCGC ATTTTTTGCC TTCGCGGTCG AGGAACTCGA CGCGCGCACG 
GTGCCGCTTG TCTCGATCAT CGTGCGAACG CATCGCCGAC CGGCATTGTT GCGGGAGGCG 
CTGATGTCGC TGTCGCATCA AACCTATCCG CGTGTCGAAG TCATTGTCGT CGAGGACGGC 
GAGCCGAATA GCCGCGCGAT GATCGAGCGC GAATTTGCAG GGCGCCTTGA TATCCGCTAT 
GAGGCGACGG GCATGCCGGT AGGCAGGAGT GCCGCCGGGA ATCTGGGGCT TTCGCTCGCC 
GCCGGGGAAT GGCTGGGATT TCTTGACGAC GACGACCAGT TCTACGCAGA CCACGTCGAG 
GCAATGATGC AGGTCGCGCG AAGCGGTACG AACCGGGCAG TCTATGGTGC GTCGCACGAG 
ATTCCGACCG AATTTGCACA ATTGACGGAC GAGGCCGCGA CATATCGCGA AGAGCCCGCG 
TCGCTCAAGT ATCGGCCATA TTCCCGCCTG GCGATGTGGC AGGAGAACCT TGCGCCGATT 
CAAGCAGTCC TCTTCCATCG AAGCTTGTAT GACGAATTGG GCGGATTTGA CGAGGACCTC 
GATCAACTCG AAGACTGGGT GCTGTGGGTA CGCTATTCGT GTGCGACTGA CTTCTCTTCG 
TTCCTGCGGG TGACATCACG CTACCGGGTG CCCATGGCGG CCAAGGTTGC CGTTGAGCGT 
CAGGCCAAGC TGCATGAAGC CTATGCCGTC GCCCTGGAGC GACAGCGAGC GATGCGAGTG 
ACGCTTAGCC CGTTCGACGT TGTCGCCATG GCGGAAGAGC AGGCCCGTCG GCATGCTATC 
GTCCACGTTT CGAGGCAAAC CGCGCGAAAG CTGATCGTGC GAGTGCCGTT CATGCGAACG 
TTGTTATCGA GCCAGGCGGG ATGGCGACGG CGCATGAGAG CGCTATATCG TCGAATGTCG 
CCGCGCTCCT GA 

 

Protein sequence

MSCVTKAGIE MRFDISVVVY RETEETLDDL LDSLAAQASC PDTVVRVWLR NNDPADADRW 
DRFVHDRSWY PFEISISHSP QNVGFGRAHN ATFEMADAPF FFVLNPDTRL HSTAVSALRK 
AIDTSAGDVG AWELRQLPYE HPKLYDPVSL STDWVTGAAV VFRRAAFAQV RGFEPRIFMY 
GEDVDLSWRM RAAGWVLHYV PHAVVVHPTY SKPMEAKPLQ IAGGVVASLQ LRTRFGSWLD 
IARGLGCWVA ELARPARFPH ARRTHLMALA RYLRSAAYFR RTGARYRKGG FRPGFRFWGY 
GDRRDGAFFA FAVEELDART VPLVSIIVRT HRRPALLREA LMSLSHQTYP RVEVIVVEDG 
EPNSRAMIER EFAGRLDIRY EATGMPVGRS AAGNLGLSLA AGEWLGFLDD DDQFYADHVE 
AMMQVARSGT NRAVYGASHE IPTEFAQLTD EAATYREEPA SLKYRPYSRL AMWQENLAPI 
QAVLFHRSLY DELGGFDEDL DQLEDWVLWV RYSCATDFSS FLRVTSRYRV PMAAKVAVER 
QAKLHEAYAV ALERQRAMRV TLSPFDVVAM AEEQARRHAI VHVSRQTARK LIVRVPFMRT 
LLSSQAGWRR RMRALYRRMS PRS