Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0893 |
Symbol | |
ID | 4679754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 890946 |
End bp | 891569 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639845167 |
Product | LysE family protein |
Protein accession | YP_992233 |
Protein GI | 121598455 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGTCA ACCCCACTCT CGCCTTCATC GCGACGTGCA TCGGCTTCGG CTTCATTCCA GGCCCGGCGC TGCTGCAAAC CGTTTCGCTG ACGTTGCAGC ACGGCCGGCG CGCAGGCGTG CTTTCGGCGC TCGGCATCCA CCTCGGCGCG TTCTTCCAGA TCTGCGCGGT CGCGATCGGC GCGGTGGTCG TGCTCGACAC GTCGCCGTGG CTCTATCACG CGCTGCGCAT CGCGGGCGGC GGGTATCTGA TCTGGCTCGG CATCCAACGC ATCCGCACGC GCGAGGCGAA CGACGGCGGC GACGGCGCGC CGTCGACGGT GCCGAAGAAC GTGATCTCGT CGAGCGCGCT CATCGAGGCG TCGAATCCGA AATCGGCGCT GTTCTATCTG TCGTTCCTGC TGCAGTTCGT CGATCCGTCC GCTTCGCTCG ATGTCGGCTG GCAGCTCTTC CTGCTCGGCG CGGGTGCAAA CCTGCTGTTC TCGCTCGCCG ATCTGACCTG CATCGCGCTC GCGCATCCGC TGCGCAAGCG CGCGGCGCCG GGCGGCACGG CGATGACCAT CGGGCGCTAT CTCGCGGGCG GGCTGTTCAT CGCGCTCGGC GTCGCCGCGA TCGTCGAGCG CTGA
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Protein sequence | MTVNPTLAFI ATCIGFGFIP GPALLQTVSL TLQHGRRAGV LSALGIHLGA FFQICAVAIG AVVVLDTSPW LYHALRIAGG GYLIWLGIQR IRTREANDGG DGAPSTVPKN VISSSALIEA SNPKSALFYL SFLLQFVDPS ASLDVGWQLF LLGAGANLLF SLADLTCIAL AHPLRKRAAP GGTAMTIGRY LAGGLFIALG VAAIVER
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