| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0879 |
|---|
| Symbol | |
|---|
| ID | 4679223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 875222 |
|---|
| End bp | 876043 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639845153 |
|---|
| Product | membrane transport solute-binding protein |
|---|
| Protein accession | YP_992219 |
|---|
| Protein GI | 121601405 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.548271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAC GAACAGCCGC CGAGCGCGGC GCGCCGGCCT TGCGCGCCGC GTTCACGCTG
CCGTTCGCGG CGGCCGCGAT CGTCGCGACC GTCGCGACGG CGGCCGAGGC GAACGCGTAC
CCGGTGACGG TGCGCAGTTG CGGGCGCGAC GTCACGTTCG AGCGTGCGCC GGCGCGCGCG
GTGAGCAACG ACGTGAACCT CACCGAGATG ATGATCGCGC TCGGCCTGCA GACGCGGATG
GCCGGCTACA CCGGCATCGC CGGCTGGAAG ACCGGCAATG CGCGGCTGCG TGCGGCGCTC
GCGGGCGTGC CCGAGCTCGC GACACACTAT CCGTCGCTCG AAGCGCTCGT CGATGCGCGC
GCCGATTTCT ACTTCGCCGG CTGGAATTAC GGGATGCATC CGGGCGGACC GGTCACGCCC
GCGTCGCTCG AACGATTCGG GATCCGAACG TACGAGCTGA CCGAATCGTG CTCGCTCGTG
ATGCGGCGGC CGCCGGCCTC GCTCGACGAC GTCTATCGCG ATCTGGCCAA TCTCGGCCGG
ATCTTCGGCG TGGACGCGCG CGCGGCGCAG GTCGCGGGCG CGATGCGCGC GCGCATCGAC
GCGGTGCGCC GCACGCTCGC GAGCGCGGCG GGCGGCGGGA CGCCGCCGCG CGTGTTCGTC
TACGACAGCG GCACCGACAA GCCGATGACG GCGGGCGCGC TCGCGATGCC CACCGCGTTG
ATCGCGGCGG CGGGCGGGCG CAACGTGATG GACGACGTGC CGCGCGGCTG GACGCAGGTG
GGCTGGAGAG CGTCGTCGCG CGCGATCCGC AGGCGATCGT GA
|
|---|
| Protein sequence | MLKRTAAERG APALRAAFTL PFAAAAIVAT VATAAEANAY PVTVRSCGRD VTFERAPARA
VSNDVNLTEM MIALGLQTRM AGYTGIAGWK TGNARLRAAL AGVPELATHY PSLEALVDAR
ADFYFAGWNY GMHPGGPVTP ASLERFGIRT YELTESCSLV MRRPPASLDD VYRDLANLGR
IFGVDARAAQ VAGAMRARID AVRRTLASAA GGGTPPRVFV YDSGTDKPMT AGALAMPTAL
IAAAGGRNVM DDVPRGWTQV GWRASSRAIR RRS
|
|---|
| |