Gene BMASAVP1_A0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A0869 
Symbol 
ID4679498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp864462 
End bp865685 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content72% 
IMG OID639845143 
Productmajor facilitator superfamily transporter 
Protein accessionYP_992209 
Protein GI121599979 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0235133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCCG ATTCAGCCGA TTCCGTCCCG TCCCCCCGCA GCGCGTTCGC GACGACGCTG 
CAGATCGTCT CCGTCGTGTC GTTCACGTTC ATCTGCTATC TGACGATCGG CCTGCCGCTC
GCGGTGCTGC CGGGTTTCGT TCATGACGAG CTCGGCTTTT CGGCGATCGT CGCGGGCGCG
GCAATCAGCG TCCAGTACTT CGCGACGCTC GCGTCGCGGC CGCTCGCGGG CCGCTGCGCG
GACACGCTCG GCCCGAAGCG CACCGTGCTG CGCGGGCTCG CCGCGTGCGG CGCGAGCGGC
GCGCTCTTGC TGTCCGCGTT CGCGTTCGCG CGCTGGCCGG CCGCGAGCAT CGGGCTGCTG
GTCGCGAGCC GGCTCGTGCT CGGCATCGGC GAGAGCCTCG TCGGCACGGG CGCGATCCTA
TGGGGAATCG GCCGCGTCGG CACCGCGCAC AACGCGCGCG TGATTTCGTG GAACGGCATC
GCGACGTACG GCGCGCTCGC GATCGGCGCG CCCGTCGGCG TCGCGATCTC GCACGCGCTG
ATCCCCGCCG TGCTCGGCAT GCTCGTGATC GCGCTCGCCG CGCTCGGCTA CTATCTCGCA
CGGCTGATCA CGCCCGTGCC GCTCGTGCAC GGCGAGCGGA TGTCGTACGC GAGCGTGCTC
ACCCGCGTGC TGCCGCACGG CCTCGGCCTC GCGCTCGGCT CGGCCGGTTT CGGCTCGATC
GCGACGTTCA TCACGCTCTA CTACGCGGCG CGGCACTGGC CGAACGCCGC GCTGTCGCTG
ACCGTGTTCG GCACGCTGTT CATCGGCGCG CGCCTGTTGT TCGCGAACAC GATCAAGACG
CACGGCGGGT TCCGCGTCGC GATCGTGTCG TTCGCGTTCG AATGCGCGGG CCTCCTGATG
CTGTGGCTCG CACCCGTGCC GCACGTCGCG CTCGTCGGCG CCGCGTTGAC GGGCTTCGGC
TTCGCGCTGA TCTTCCCCGC GCTCGGCGTC GAGGCGGTCG CGCTCGTGCC GCCCGCGAGC
CGCGGCGCGG CGCTGTCCGC GTATTCGGTG TTCCTCGATC TGTCGCTCGG CATCACGGGG
CCGCTCGCCG GTTATGTCGC GGGCGCGTTC GGCTATCCGC AGGTGTTCCT GTGCGCGGCC
GTGGCGGCGG CGGCGGGCGT CGCGCTATCG ACGGTGCTGT ATCAGCGGCA GGCGCGCCTG
TCCGGCAGCG GCGCGGCCGC CTGA
 
Protein sequence
MSADSADSVP SPRSAFATTL QIVSVVSFTF ICYLTIGLPL AVLPGFVHDE LGFSAIVAGA 
AISVQYFATL ASRPLAGRCA DTLGPKRTVL RGLAACGASG ALLLSAFAFA RWPAASIGLL
VASRLVLGIG ESLVGTGAIL WGIGRVGTAH NARVISWNGI ATYGALAIGA PVGVAISHAL
IPAVLGMLVI ALAALGYYLA RLITPVPLVH GERMSYASVL TRVLPHGLGL ALGSAGFGSI
ATFITLYYAA RHWPNAALSL TVFGTLFIGA RLLFANTIKT HGGFRVAIVS FAFECAGLLM
LWLAPVPHVA LVGAALTGFG FALIFPALGV EAVALVPPAS RGAALSAYSV FLDLSLGITG
PLAGYVAGAF GYPQVFLCAA VAAAAGVALS TVLYQRQARL SGSGAAA