Gene BMASAVP1_A0867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A0867 
Symbol 
ID4680446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp862039 
End bp862986 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content71% 
IMG OID639845141 
ProductAraC family transcriptional regulator 
Protein accessionYP_992207 
Protein GI121598439 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000394258 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCGC CTTCCCCGCC TCCGCTCGAC GCCCGCCTGT CCGTGCCCGC CGCCGATTTC 
GTCGGCGGCG AAGTGCCGTT CGGCCTGCAA TCCGTCTGCC GGACGCTCGC CGAGGCGAAC
GCGAAGCTCG AGCGCTTCGC ATGGCTCGGC GATCATCTCG CGATCGCCGA ATGGACGCGC
GTCACCGACG AAAGCGAGAC GGTGTACGCG CAGCCCGGAC ATCACACGCT ATCGTGCTAC
CTGGACGGCG GCTACCGCAC CGAGCGGCAA AAAATCGCGC GCTACGGCGC GCCGAGCCTG
CTCTGCGCGC TGCCGGGCGA CCACGAATCG CGCTGGTGGG TGCGCGGCGA GATGCACTTC
GTGCACCTGT ACTTTCTGCC CGAGCACTTC GCGCGGCGCG CGGTGCGCGA GCTCGATCGC
GAGCCGCGCG AGCTGAAGCT CGCCGATCGC ACGTATTTCG AGGATGCGCG CGTCGCCGCG
CTATGCCGCT CGCTCGCGCT CGAGCGCTGG GACGACGCCG ATGGCCGGCT GCGCGTGAAC
GAAACCGCGC ACGAGGTGCT GAGCCTCCTG CTGCGCGGGC AGAGCATGAC GGGCGCCGGC
GCGCCGTTCA AGGGCGGCCT CGCGCCCGCC GTGCGCCGGC GCGTGCGCGA CTACATCGAC
ACGTACCTCG CGCAGCCGAT GACGCTCGGC GAGCTCGCGC AGATCGCGTC GCTGTCCGAA
TACCATTTCT CGAGGATGTT CAGCGTATCG TTCGGCCGCG CGCCGCACGC GTGGATCGCC
GAGCAGCGCC TCGCCCGCGC GCGCACGCTG CTGCGCACGA CATCGCTGCC GCTCGCGCAG
GTCGCCGCGC AATGCGGCTA CGCGAACGCC GTGCATCTCA GCCACCGCTT TCGCGACACG
CACGGCGCGA CGCCGGGCGC GTACCGCCGC GCGATGCAGG CCGCCTAG
 
Protein sequence
MHAPSPPPLD ARLSVPAADF VGGEVPFGLQ SVCRTLAEAN AKLERFAWLG DHLAIAEWTR 
VTDESETVYA QPGHHTLSCY LDGGYRTERQ KIARYGAPSL LCALPGDHES RWWVRGEMHF
VHLYFLPEHF ARRAVRELDR EPRELKLADR TYFEDARVAA LCRSLALERW DDADGRLRVN
ETAHEVLSLL LRGQSMTGAG APFKGGLAPA VRRRVRDYID TYLAQPMTLG ELAQIASLSE
YHFSRMFSVS FGRAPHAWIA EQRLARARTL LRTTSLPLAQ VAAQCGYANA VHLSHRFRDT
HGATPGAYRR AMQAA