Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0862 |
Symbol | |
ID | 4681964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 856784 |
End bp | 857443 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639845136 |
Product | nitroreductase family protein |
Protein accession | YP_992202 |
Protein GI | 121600363 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | [TIGR02476] cob(II)yrinic acid a,c-diamide reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00254558 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTTTCG ACGAACCCGC GATCGCCGCC GTCTACCGCG CGATCTTCGA GCGGCGCGAC ATGCGCCATT TCACGTCCGC CCCGGTCGAT CCCGCCGTGC TCGCGCGCCT GCTGCGCGCC GCGCACCACG CACCGAGCGT CGGCTTCATG CAGCCGTGGC GCTTCATCCG CGTGACCGAT CCGGCGCTTC GCGAGCAGAT CCACGCGCTC GTCGACGCCG AACGCCGCGC CACCGCCGAC GCGCTCGGCG AGCGGCACGA CGAGTTCATG CGGCTGAAGG TCGAGGGCGT GCGCGAATGC GGCGAGCTCC TCGTCGTCGC GCTCGCCGAT GGGCGCGAGC GGCACGTGTT CGGCCGCCGT ACGCTGCCGG AAATGGATCT CGCGTCGGCC GCGTGCGCGA TCCAGAACAT GTGGCTCGCC GCGCGCGCCG AAGGGCTCGG AATGGGCTGG GTGTCGCTCT TCGACGTCGA CGCGCTGCGC CGGCTGCTCG CGATGCCCGA CGGCGCGACG CCGATCGCCG TGCTCTGCCT CGGCCACGTC GACGCGTTCT ACGCGAAGCC GATGCTCGAG CAAGAGCGCT GGGCCACGCG GATGCCGCTC GAGGCATGCC TGTACGAGAA CGGCTGGGAC GCCCCGCCGA CGTCTGCGCG CAACACCTGA
|
Protein sequence | MRFDEPAIAA VYRAIFERRD MRHFTSAPVD PAVLARLLRA AHHAPSVGFM QPWRFIRVTD PALREQIHAL VDAERRATAD ALGERHDEFM RLKVEGVREC GELLVVALAD GRERHVFGRR TLPEMDLASA ACAIQNMWLA ARAEGLGMGW VSLFDVDALR RLLAMPDGAT PIAVLCLGHV DAFYAKPMLE QERWATRMPL EACLYENGWD APPTSARNT
|
| |