| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0811 |
|---|
| Symbol | |
|---|
| ID | 4679307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 817499 |
|---|
| End bp | 818716 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639845085 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_992154 |
|---|
| Protein GI | 121598921 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.12855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG CGGCAACCAA CGGCGCGCGC GTCGTCGCGA CATTCGCCGC GCCCGGCCGG
ATCCGGCTCG CGTCGCTGCC GCCGCTCGCG CTGTACGTGC ACTTCCCGTG GTGCGTGCGC
AAGTGCCCGT ACTGCGACTT CAATTCGCAC GAATGGAAGG ACGGCGGCGC GCTGCCCGAG
CGCGACTATC TGGACGCGCT GCGCGCCGAT CTCGAGCACG CGCTGCCGCT CGTCTGGGGA
CGCCAGGTAC ACACGGTGTT CATCGGCGGC GGCACGCCGA GCCTGCTGTC GGCGGCGGGG
CTCGACCGGC TGCTGTCCGA CGTGCGCGCG CTGCTGCCGC TCGACGCGGA CGCCGAGATC
ACGCTCGAGG CGAACCCCGG CACGTTCGAG GCGGCGAAGT TCGCGCAATT CCGCGCGAGC
GGCGTCAATC GCCTGTCGAT CGGCATCCAG AGCTTCAACG AGGCGCATCT GAAGGCGCTC
GGGCGGATTC ACGACGCCGC GCAGGCGCGC GCCGCGGTCG AGATCGCCGC GCGCACGTTC
GAGAACTTCA ATCTCGACCT GATGTTCGCG CTGCCGAACC AGACGCTCGA CGAATGCCGC
GCGGATCTCG AAACCGCGCT CGCGTTCGCG CCGCCGCATC TGTCGCTTTA TCATCTGACG
CTCGAGCCGA ATACGTATTT CGCGAAGTTT CCGCCCACCG TGCCGGACGA CGACGCGTCG
GCCGACATGC AGGACTGGCT GCACGAACGC ACCGCGCAGG CAGGTTACGC GCGCTACGAG
GTGTCCGCTT ATGCGAAGCC GCATCGGCGG AGCAAGCACA ACCTCAACTA CTGGCGCTTC
GGCGACTATC TGGGAATCGG CGCGGGCGCG CACACGAAGC TGTCGTTTCC GAACCGGATC
CTGCGCCAGG CACGCTACAA GCATCCGGCG ACGTTCATCG AACAGGCGAA AGCGGGTACT
CCCGTGCAGG AAGAGCGGGA GGTGGGGCCG CGCGATCTGC CGTTCGAGTT CATGCTGAAC
GCGCTGCGGC TTGTCGACGG CGTGCCCGCA TACAGCTTCG AGGCGCGCAC CGGCATGTCG
CTCGCCGCGA TCGGTCCTGC GCTCGCGCAG GCCGAGCAGC GCGGCCTCCT CGTGCACGAT
CACACGCGCA TCGCGCCGAC GCCGCTCGGC CAGCGCTTCC TCAACGATCT GCAGGCGCTG
TTCCTGCGCG ACGCATGA
|
|---|
| Protein sequence | MSDAATNGAR VVATFAAPGR IRLASLPPLA LYVHFPWCVR KCPYCDFNSH EWKDGGALPE
RDYLDALRAD LEHALPLVWG RQVHTVFIGG GTPSLLSAAG LDRLLSDVRA LLPLDADAEI
TLEANPGTFE AAKFAQFRAS GVNRLSIGIQ SFNEAHLKAL GRIHDAAQAR AAVEIAARTF
ENFNLDLMFA LPNQTLDECR ADLETALAFA PPHLSLYHLT LEPNTYFAKF PPTVPDDDAS
ADMQDWLHER TAQAGYARYE VSAYAKPHRR SKHNLNYWRF GDYLGIGAGA HTKLSFPNRI
LRQARYKHPA TFIEQAKAGT PVQEEREVGP RDLPFEFMLN ALRLVDGVPA YSFEARTGMS
LAAIGPALAQ AEQRGLLVHD HTRIAPTPLG QRFLNDLQAL FLRDA
|
|---|
| |