Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0732 |
Symbol | |
ID | 4678509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 749327 |
End bp | 750634 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639845006 |
Product | putative amino acid ABC transporter, periplasmic amino acid-binding protein |
Protein accession | YP_992078 |
Protein GI | 121600647 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.909457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTC GCAGTCTTTT GAAGTTCGGA TCGATGGCAG GCGTCATGGC GCTCGCGGGG CAAAGCCCCG TCGCGCGCGC GGCGGATTCG GGCAAAGGCC CGATCAAGGT CGGCATCCTG CATTCGCTGT CGGGCACGAT GGCGATCTCC GAGACTTCGC TCAAGGACAC CGCGCTGATG ACGATCGCCG ACATCAACAA GAACGGCGGC GTGCTCGGGC GGCCGCTGCA GCCCGTCGTC GTCGATCCCG CGTCGAACTG GCCGCTGTTC GCCGAGAAGG CGCGCCAGTT GCTCACGCAG GAGAAGGTCG CATGCGTGTT CGGCTGCTGG ACGTCGGTGT CGCGCAAGTC GGTGCTGCCC GTGTTCGAGG AGCTGAACGG CCTGCTCTAC TACCCGGTGC AGTACGAGGG CGAGGAGATG TCGCGCAACG TGTTCTACAC GGGCGCCGCG CCGAACCAGC AGGCGATTCC GGCCGTCGAG TACATGATGA GCGCCGAAGG CGGCGGCGCG AAGCGCTTCT TCCTGCTCGG CACCGATTAC GTCTACCCGC GCACGACCAA CAAGATCCTG CGCGCGTTCC TGAAATCGAA GGGCGTGAAA GATTCCGATA TTCAGGAAGT CTACACACCG TTCGGGCACA GCGATTACCA GACGATCGTC GCGAACATCA AGACCTTCGC GCAAGGCGGC AAGACCACCG TGATCTCGAC GATCAACGGC GATTCGAACG TGCCGTTCTA CAAGGAGCTC GGCAATCAGG GGCTCAAGGC GACCGACGTG CCCATCGTCG CGTTCTCGGT CGGCGAGGAG GAACTGCGCG GCATCGACAC GAAGCCGCTC GTCGGGCATC TGGCCGCGTG GAATTACTTC ATGTCGGTGA AGGGGCCGGC GAACGCGAAG TTCAAGGAGC AGTTCGCCGC GTGGGTGAAG TCGCAGAATC TGCCGGGCGG CGCGAAGCGC GTGACCAACG ATCCGATGGA GGCGACGTTC GTCGGCATCC ACATGTGGAA GCAGGCGGTC GAGAAGGCGA AGAGCACCGA TGTCGACCGC GTGCGCACGG CGATGATCGG CCAGAGCGTC GCCGCGCCGT CGGGCTTCAC ACTGACGATG GACGGCAACC ATCATCTGCA CAAGCCGGTG ATGATCGGAG AGATTCGCGG CGACGGCCAG TTCAACGTCG TCTGGAAAAC GAAGACGGCG ATTCGCGCGC AGCCGTGGAG CCCGTTCATC GCGGGCAACC AGGGCAAGCC GGACGTGGTC GGCTCGATTC CGGAGTTCCT GCGCCGCCGT CGCGCCGCGC TCGCCTGA
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Protein sequence | MKRRSLLKFG SMAGVMALAG QSPVARAADS GKGPIKVGIL HSLSGTMAIS ETSLKDTALM TIADINKNGG VLGRPLQPVV VDPASNWPLF AEKARQLLTQ EKVACVFGCW TSVSRKSVLP VFEELNGLLY YPVQYEGEEM SRNVFYTGAA PNQQAIPAVE YMMSAEGGGA KRFFLLGTDY VYPRTTNKIL RAFLKSKGVK DSDIQEVYTP FGHSDYQTIV ANIKTFAQGG KTTVISTING DSNVPFYKEL GNQGLKATDV PIVAFSVGEE ELRGIDTKPL VGHLAAWNYF MSVKGPANAK FKEQFAAWVK SQNLPGGAKR VTNDPMEATF VGIHMWKQAV EKAKSTDVDR VRTAMIGQSV AAPSGFTLTM DGNHHLHKPV MIGEIRGDGQ FNVVWKTKTA IRAQPWSPFI AGNQGKPDVV GSIPEFLRRR RAALA
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