| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0729 |
|---|
| Symbol | |
|---|
| ID | 4680695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 745593 |
|---|
| End bp | 746456 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639845003 |
|---|
| Product | putative amino acid ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_992075 |
|---|
| Protein GI | 121598743 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGA ACACGATGAT TCGCGAGCCC GCGCAGCCGG ACGGCGCCGA CCGGCTCGCC
GTCAGCGGCG CGGCCGGGAT GTCGCACGTC GTCACGCCCG GCGCGATCGA CACGTCGCAC
GGCACGATCC TCTATCTCGA CGACATCGAA GTGAGCTTCG ACGGCTTTCG CGCGCTGAAG
AAGCTGTCGC TGTCGATCGA CGTCGGCGAG CTGCGCTGCG TGATCGGCCC GAACGGCGCC
GGCAAGACGA CGATGATGGA CGTGATCACC GGCAAGACAC GGCCCGATTC GGGCCACGCG
TTCCTCGGCC AGACACTCGA CCTCACGCGC ATGAACGAGC CGCAGATCGC ACGCGCGGGC
ATCGGCCGCA AGTTTCAGAA GCCGACCGTG TTCGAGCAGC ATCCGGTATG GGAGAACCTC
GAGCTCGCGA TGGCCGCCGA CAAGCGCTGG TTCGCGTCGC TGCGCGCGCG GCTCGACCGA
GCGGCGCAGG CGCGGATCGA GCAGACGCTC GCGCTGATCC GGCTCGAGGA CAGCGCGTAC
CGGCTCGCGG GCGAGCTGTC GCACGGGCAG AAGCAGCGGC TCGAGATCGG CATGCTGCTG
ATGCAGCGCC CCGCGCTCTT GCTGCTCGAC GAGCCCGCGG CCGGCATGAC CGACCACGAG
ACGATGGAGC TCGCCGAGCT GCTGAACACG CTGCGCGGCA CGTGCTCGAT GATGGTCGTC
GAGCACGACA TGGAATTCGT CGCGGCGCTC GCGGGCGACG CGGGACGCGT GACCGTGATG
GCGGAAGGCG CGGTGCTCGC GCAAGGCACG CTCGATCAGG TGAAGCGCGA CGAAGCGGTG
ATCGAGTCTT ATCTCGGACG ATGA
|
|---|
| Protein sequence | MNENTMIREP AQPDGADRLA VSGAAGMSHV VTPGAIDTSH GTILYLDDIE VSFDGFRALK
KLSLSIDVGE LRCVIGPNGA GKTTMMDVIT GKTRPDSGHA FLGQTLDLTR MNEPQIARAG
IGRKFQKPTV FEQHPVWENL ELAMAADKRW FASLRARLDR AAQARIEQTL ALIRLEDSAY
RLAGELSHGQ KQRLEIGMLL MQRPALLLLD EPAAGMTDHE TMELAELLNT LRGTCSMMVV
EHDMEFVAAL AGDAGRVTVM AEGAVLAQGT LDQVKRDEAV IESYLGR
|
|---|
| |