Gene BMASAVP1_A0694 details

Gene Information

• Locus tag: BMASAVP1_A0694
• Symbol: parE
• ID: 4680205
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 708689
• End bp: 710671
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639844968
• Product: DNA topoisomerase IV subunit B
• Protein accession: YP_992040
• Protein GI: 121598410
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCACGA AAAAGCCTGC AGCGGCCTAT AGCGAAGCAT CGATCAAGGT GCTCAAGGGC 
CTCGAGCCCG TCAAGCAGCG GCCCGGCATG TACACGCGCA CCGAGAATCC GCTGCACATC 
ATCCAGGAAG TGATCGACAA CGCGTCCGAC GAGGCGTTGG GCGGCTTCGG CAAGCAGATC 
ACGGTCACGC TGCATCCCGA TCAATCGGTG TCCGTCGAGG ACGACGGGCG CGGCATTCCG 
TTCGGGCTGC ATCCGGAGGA GAAGGTGCCC GTCGTCGAGA TCGTGTTCAC GCGGCTGCAC 
GCCGGCGGCA AGTTCGACAA GGCGAAGGGC GGCGCGTACA CGTTCTCGGG CGGTCTGCAC 
GGCGTGGGCG TGTCGGTGAC GAATGCGCTC GCGACGCGCC TCGACGTGAC CGTCTGGCGC 
GACGGCAGGA TCGCGCAGCT CGGCTTCGCC GACGGCGACG TCGTCAAGCC GCTCGCGACG 
CAAGGCGCGG GCCGTGGCGA GAAGAAGTCC GGCACGCGGG TGACCGTGTG GCCGAATCCG 
AAATACTTCG ATTCGCCGAA TCTGCCGCTC GGCGAGCTGC AGCGGCTCCT GCGCTCGAAG 
GCGGTGCTGC TGCCGGGCGT CGAGGTCGTG CTCGTCAACG AGAAGACGGG CGAGCGGCAG 
AGCTGGAAAT ACGACGACGG CCTGCGCGGT TACCTGCTCG ACGAGATGAA CGGCAGCGAG 
CTGCTGATTC CGCTTTTCGA GGGCGAGCGC TTCGCCGATT CCCGCTCGGG CGACGACACG 
TTCGCCGAGG GCGAGGGCGC GTCGTGGGTC GTCGCGTGGA GCGAGGAAGG CTCGCTCGTG 
CGCGAGTCGT ACGTGAACCT GATTCCGACG CCCGCGGGCG GCACGCACGA ATCCGGCCTG 
CGCGACGGCC TCTATCAGGC GGTGAAGAGC TTCGTCGAGC TGCACAACCT GCAGCCGAAG 
GGCGTGAAGC TGCTCGCGGA GGACGTGTTC GCGCGCGTGT CGTTCGTGCT CTCGGCGAAG 
GTGCTCGATC CGCAGTTCCA GGGGCAGATC AAGGAGCGCC TGAACAGCCG CGACGCGGTG 
AAGCTCGTGT CGTCGTTCAC GCGCCCGGCG CTCGAGCTGT GGCTCAACCA GCACGTCGAG 
CACGGCAAGA AGCTCGCCGA GCTCGTGATC AAGCAGGCGC AGGCGCGCAC GCGCGCGGGC 
CAGAAGGTCG AGAAGAAGAA GAGTTCCGGC GTCGCGGTGC TGCCCGGCAA GCTGACCGAC 
TGCGAGACCG AGGACATCGC GCGCAACGAG CTGTTCCTCG TCGAGGGCGA TTCGGCGGGC 
GGCTCCGCGA AGATGGGCCG CGACAAGGAA TACCAGGCGA TCCTGCCGCT GCGCGGCAAG 
GTGCTCAACA CCTGGGAGAC CGAGCGCGAT CGCCTGTTCG CGAACAACGA GGTGCACGAC 
ATCTCGGTGG CGATCGGCGT CGATCCGCAC GGCCCGGACG ACAGCGTCGA CGTGTCGAAC 
CTGCGTTACG GCAAGATCTG CATCCTGTCG GATGCGGATG TCGACGGCGC GCACATTCAG 
GTGTTGCTGC TCACGCTGTT CTTCAAGCAT TTCCCGCAAC TGATCGAGCG CGGCCACGTG 
TTCGTCGCGC GGCCGCCGCT TTTCCGGGTC GACGCGCCCG CGCGCGGCAA GAAGCCGGCG 
CAGAAGCTCT ACGCGCTCGA CGAAGGCGAG CTCGAGGCGA TCCTCGACAA GCTGCGCAAG 
GACGGCGTGC GCGAATCGCA ATGGACGATC AGCCGCTTCA AGGGCTTGGG CGAAATGAGC 
GCCGAGCAGT TGTGGGACAC GACGATGAAC CCCGACACCC GCCGCCTGAT GCCCGTCGCG 
CTCGGCGAGC TCGACTTCGA GGCGACGGTC GCGCGGATGA CTATGCTGAT GGGCAAGGGC 
GAGGCCGCCG CGCGCCGCAA CTGGCTCGAG GAAAAGGGCA ACGAAGTCGA AGCGGATATC 
TGA 

 

Protein sequence

MSTKKPAAAY SEASIKVLKG LEPVKQRPGM YTRTENPLHI IQEVIDNASD EALGGFGKQI 
TVTLHPDQSV SVEDDGRGIP FGLHPEEKVP VVEIVFTRLH AGGKFDKAKG GAYTFSGGLH 
GVGVSVTNAL ATRLDVTVWR DGRIAQLGFA DGDVVKPLAT QGAGRGEKKS GTRVTVWPNP 
KYFDSPNLPL GELQRLLRSK AVLLPGVEVV LVNEKTGERQ SWKYDDGLRG YLLDEMNGSE 
LLIPLFEGER FADSRSGDDT FAEGEGASWV VAWSEEGSLV RESYVNLIPT PAGGTHESGL 
RDGLYQAVKS FVELHNLQPK GVKLLAEDVF ARVSFVLSAK VLDPQFQGQI KERLNSRDAV 
KLVSSFTRPA LELWLNQHVE HGKKLAELVI KQAQARTRAG QKVEKKKSSG VAVLPGKLTD 
CETEDIARNE LFLVEGDSAG GSAKMGRDKE YQAILPLRGK VLNTWETERD RLFANNEVHD 
ISVAIGVDPH GPDDSVDVSN LRYGKICILS DADVDGAHIQ VLLLTLFFKH FPQLIERGHV 
FVARPPLFRV DAPARGKKPA QKLYALDEGE LEAILDKLRK DGVRESQWTI SRFKGLGEMS 
AEQLWDTTMN PDTRRLMPVA LGELDFEATV ARMTMLMGKG EAAARRNWLE EKGNEVEADI