| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0685 |
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| Symbol | |
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| ID | 4679214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 698660 |
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| End bp | 699238 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639844959 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | YP_992031 |
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| Protein GI | 121599756 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.214118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTCA TCGCCCTCAA CAAGCCGTTC GGCACGATCT GCCAGTTCTC TGCGCACGAA
ACCCGCGCAT CGCTCGGCGA CTGGGTGAAG ACGCCCGGCG TCTATCCGGC GGGCCGCCTC
GATGCCGACA GCGAGGGGCT GCTCCTGCTC ACCGACGACG GCGCGCTGCA GGCGAAGATC
GCCGAGCCGC GCCACAAGCT CGTCAAGCGC TACTGGGCGC AGGTCGAGGG CGCGCCCGAC
GCGGCCGCGC TCGCCGCGCT CGAGCGCGGC GTCGATCTCG GCGATTACGT GAGCCGCCCG
TGTCGCGCGC GCTTCATCAC GCCGCCCGGC GCGCTCTGGC CGCGCAACCC GCCGATCCGC
CACCGCGCGG CGATCCCGAC GGCCTGGATC GAGCTCGAGA TCGCCGAAGG CAAGAACCGC
CAGGTGCGGC GAATGACCGC GGCCGTCGGC TTCCCGACGC TGCGCCTCGT TCGCGTCGGC
ATCGGCGCGC TCGACGTGTT CGCGCTCGGC CTTGCGCCCG GCGAAACGCG CGAGCTGCCG
CCGCGCGCGC CGTGGGAACG CGCGCAGCGG CCCGGATGA
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| Protein sequence | MRLIALNKPF GTICQFSAHE TRASLGDWVK TPGVYPAGRL DADSEGLLLL TDDGALQAKI
AEPRHKLVKR YWAQVEGAPD AAALAALERG VDLGDYVSRP CRARFITPPG ALWPRNPPIR
HRAAIPTAWI ELEIAEGKNR QVRRMTAAVG FPTLRLVRVG IGALDVFALG LAPGETRELP
PRAPWERAQR PG
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