Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0678 |
Symbol | |
ID | 4679676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 690033 |
End bp | 691652 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639844952 |
Product | integral membrane protein MviN |
Protein accession | YP_992024 |
Protein GI | 121600325 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGGTGC GCGCCTTTTG CTCGAACGTA TCGGTCGCCG CCGCCCGAGG TCCGTATAAT AAGCGCCCCA TGAATCTATT CCGAGCCCTG CTGACGGTCA GCGGCTTCAC GCTGCTGTCG CGCGTGACCG GACTGGCCCG TGAGACGCTG ATCGCCCGCG CGTTCGGCGC CAGTCAATTC ACCGACGCGT TCTACGTCGC ATTCCGTATT CCGAACCTGC TGCGCCGGCT GTCCGCCGAA GGCGCGTTTT CGCAGGCGTT CGTGCCGATT CTCGCCGAGT TCAAGAATCA AAAAGGGCAC GATGCGACGA AGGCGCTGGT CGACGCGATG TCGACCGTGC TCGCGTGGGC GCTCGCGCTC CTGTCGCTCG CGGGGATCGC AGGCGCGTCG TGGGTGGTGT TCGCGGTCGC GTCGGGGCTG CGCACGGACG GCCAGGCGTT CCCGCTCGCT GTCGCGATGA CGCGGATCAT GTTCCCGTAC ATCGTGTTCA TTTCGCTCAC CACGCTCGCG TCGGGCGTGC TCAACACGTA CAAGCGTTTC TCGCTGCCGG CGTTCGCGCC CGTGCTGCTG AACGTCGCGT TCATCGTCGC GGCGGTGTTC GTCGCGCCGC ACCTGAAGGT GCCCGTCTAT GCGCTCGCAT GGGCGGTGAT CGCGGGCGGC GCGCTGCAGT TCGCGGTGCA GTTGCCGGGG CTGAAGAAGA TCGACATGAT GCCCGCGATC GGCGTGAATC CGCTGCGCGC GCTCGCGCAC CCGGGCGTGA AGCGTGTGCT GGCGAAGATG GTGCCCGCGA CGTTCGCGGT GTCGGTCGCG CAACTGTCGC TCATCATCAA TACGAACATC GCGTCGCGGC TCGGGCAGGG CGCCGTGTCG TGGATCAATT ACGCGGACCG GCTGATGGAG TTTCCGACCG CGCTCCTCGG CGTCGCGCTC GGCACGATCC TGCTGCCGAG CCTGTCGAAG GCGCACGTCG ACGCCGATTC GACCGAGTAT TCGGCGCTCC TCGACTGGGG CCTGCGGGTC ACGTTCCTGC TCGCGGCGCC GAGCGCGCTC GCGCTGTTCT TCTTCGCCGA GCCGCTCACG GCGACGCTGT TCAATTACGG CAAATTCGAC GCGCACACGG TCACGATGGT CGCGCGCGCG CTCGCGACGT ACGGGATCGG CCTCGTCGGC ATCATCCTCA TCAAGATCCT CGCACCCGGC TTCTATGCGA AGCAGGACAT CAAGACGCCC GTGAAGATCG CGATCGGCGT GCTCGTCGTC ACGCAGTTGT CGAACTACGT GTTCGTGCCG ATCATCGGCC ACGCGGGGCT CACGCTGAGC ATCGGCGTGG GCGCGTGCCT GAACTCGCTG CTGCTCTTCA TCGGGCTGCG CCGCCGCGGC ATCTATCAGC CGTCGTCCGG CTGGCTGCGC TTTTTCGCGC AGCTCGCGGG CGCCTCGCTC GTGCTCGCCG GCGTGATGCA CTGGCTCGCG ATCAACTTCG ACTGGACCGC GATGCGCGCG GCGCCGCTCG AGCGGATCGC GCTGATGGCC GCCTGCCTCG TTCTGTTCGC TGCACTATAT TTCGGTATGT TGTGGCTGAT GGGTTTCAAA TACGCGTACT TCAGACGGCG CGCCAAGTAA
|
Protein sequence | MPVRAFCSNV SVAAARGPYN KRPMNLFRAL LTVSGFTLLS RVTGLARETL IARAFGASQF TDAFYVAFRI PNLLRRLSAE GAFSQAFVPI LAEFKNQKGH DATKALVDAM STVLAWALAL LSLAGIAGAS WVVFAVASGL RTDGQAFPLA VAMTRIMFPY IVFISLTTLA SGVLNTYKRF SLPAFAPVLL NVAFIVAAVF VAPHLKVPVY ALAWAVIAGG ALQFAVQLPG LKKIDMMPAI GVNPLRALAH PGVKRVLAKM VPATFAVSVA QLSLIINTNI ASRLGQGAVS WINYADRLME FPTALLGVAL GTILLPSLSK AHVDADSTEY SALLDWGLRV TFLLAAPSAL ALFFFAEPLT ATLFNYGKFD AHTVTMVARA LATYGIGLVG IILIKILAPG FYAKQDIKTP VKIAIGVLVV TQLSNYVFVP IIGHAGLTLS IGVGACLNSL LLFIGLRRRG IYQPSSGWLR FFAQLAGASL VLAGVMHWLA INFDWTAMRA APLERIALMA ACLVLFAALY FGMLWLMGFK YAYFRRRAK
|
| |