Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0669 |
Symbol | xerD |
ID | 4679444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 681325 |
End bp | 682242 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639844943 |
Product | site-specific tyrosine recombinase XerD |
Protein accession | YP_992015 |
Protein GI | 121601112 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACGCGC TTGCCGCGTC GCCGGCGTGG CTCGACAGCC GCGCGTCGAT CGATCTGTTC TGCGACGCGA TGTGGCTCGA GCACGGGCTG TCGCGCAACA CGCTCGACGC GTACCGGCGT GATCTGCAAC TGTTCGCGCA ATGGCTCGCC GCGCGGCATG CGGCGAGCGT CGATCATGCG AGCGAGCCGA CGCTGACCGA ATACATCGCC GCGCGCAGCG ACGGCAAGGC GACGTCGTCG AATCGCCGGC TATCGGTGTT TCGCCGCTAC TACGGCTGGG CGGTGCGCGA GCACCGCGCG GCCGTCGATC CGACGCTCAG GATCGCGTCG GCGAAGCAGG CGCCGAGGTT TCCGTCGACG CTGTCCGAGG CGCAGGTCGA GGCGCTTCTC GCCGCGCCCG ACGTCGATAC GCCGCTCGGC CTGCGCGACC GCACGATGCT CGAACTGATG TATGCGAGCG GGTTGCGCGT GAGCGAGCTC GTCACGCTGA AGACGGTCGA GGTCGGATTG AACGAAGGCG TGGTGCGCGT GACGGGCAAG GGTTCGAAAG AGCGGCTCGT GCCGTTCGGC GAAGTCGCGC ACGGCTGGAT CGAGCGCTAT CTGCGCGATG CACGGCCCGC GCTACTCGGT GCGCGCGCGG CGGATGCGCT GTTCGTCACC GCACGCGGCG ACGGCATGAC GCGCCAGCAA TTCTGGAACA TCATCAAGCG CCATGCGCAG CAGGCGGATG TTCGCGTGCA TCTGTCGCCG CATACGCTGC GGCACGCGTT CGCGACGCAT CTGCTCAATC ACGGCGCGGA CCTGCGGGTC GTGCAACTGC TGCTCGGCCA TAGCGATATC TCGACGACGC AGATCTACAC GCACGTCGCG CGCGAGCGGC TGAAGACGCT GCATGCGGCG CATCATCCGC GCGGATGA
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Protein sequence | MDALAASPAW LDSRASIDLF CDAMWLEHGL SRNTLDAYRR DLQLFAQWLA ARHAASVDHA SEPTLTEYIA ARSDGKATSS NRRLSVFRRY YGWAVREHRA AVDPTLRIAS AKQAPRFPST LSEAQVEALL AAPDVDTPLG LRDRTMLELM YASGLRVSEL VTLKTVEVGL NEGVVRVTGK GSKERLVPFG EVAHGWIERY LRDARPALLG ARAADALFVT ARGDGMTRQQ FWNIIKRHAQ QADVRVHLSP HTLRHAFATH LLNHGADLRV VQLLLGHSDI STTQIYTHVA RERLKTLHAA HHPRG
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