Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0645 |
Symbol | mdlC |
ID | 4680906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 657442 |
End bp | 659061 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639844919 |
Product | benzoylformate decarboxylase |
Protein accession | YP_991991 |
Protein GI | 121600770 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0521172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCCC CCGATCTTCG CGCCGACGCG CCCGCGCGCG CGCCGTACAC GGTGCGCGAC GCCGTGATCG ATCTGCTGCG CCGGTTCGGC ATCCGCAAGG TATTCGGCAA TCCGGGCTCG ACCGAGCTGC CGATGTTCCG CAATTTCCCC GACGATTTCG AATACGTGCT CGGCCTGCAC GAGGCGGTGG CCGTCGGGAT GGCGGACGGC TACGCGCAGG CGAGCGGCAA CGCCGCCGTC GTGAATCTGC ACTCGGCGGC GGGCGTCGGC AACGCGATGG GCGTGCTGTT CACCGCGTAC CGGAACAAGA CGCCGCTCGT CGTCACGGCC GGCCAGCAGG CGCGCTCGAT CCTGCCGTTC GAGCCGTTTC TCGCGTCGGT GCAGGCGGCC GAATTGCCGA AGCCGTACGT GAAATGGAGC ATCGAGCCCG CGCGCGCCGA GGACGTGCCC GCCGCGATCG CGCGCGCGTA TCATGTCGCG ATGCAGGAGC CGCGCGGGCC CGTGTTCGTG TCGATTCCGG CCGACGACTG GGATCGACCC GCCGAGCCCA TGCCCGCGCG CACGGTGAGC AGCGAAGTGC GGCCCGCGCC CGAGGCGCTC GCGCGGCTCG GCGACGCGCT CGACGCGAGC GAGCGCCCGG CGTTCGTGGT CGGCGCGGCG GTGGCGCGCG CGGGCGCGTG GGACGACGCG GTGCGGCTCG CCGAGCGGCA CCGCGCGCGC GTGTACGCCG CGCCGATGTC GGGCCGTTGC AGCTTTCCCG AGGACCATCC GCTCTTCGCG GGCTTTCTGC CGCCGATCCG CGAGCGCATC GTCGAACAGC TCGCCGGCCA CGATTTCATC CTCGCGTTCG GCGCGCCCGT CTTCACGTAT CACATCGAGG GCTTCGGCCC GCACGTGCCC GCGGGCGCGG CGCTGCATCA GCTCGTCGAC GATCCGTCGG TGGCCGCGTG GACGCCCGTG GGCGACGCGG TCGTCGGCAA TCTGCGGCTC GCCGCGCGCG ATCTGCTCGC GCGCGCCGCG CCGCGCGAGC GGCCGATGCC CGCGCCGCGC GCGCCGCGCG GGCGCGTCGG CCCGGGCGCG CCCGGCGAGC GGATGCCGGT GGCGTTCGCG TTGCAGACGC TCGCCGACGT GCGCGGCTCG CGCGACGTCG TCGTCGAGGA AGCGCCGAGC GCGCGGCCGG CCATGCACGA GCACCTGCCG TTCTCGAGCG CCGACACGTT CTACACGATG GACAGCGGCG GCCTCGGTTA CGGGATGCCG GCCGCTCTCG GCATCGCGCT CGGCTCGCCG GGGCGGCGCG TGATCGCGCT GATCGGCGAC GGCTCGAGCC TCTATTCGAT TCAGGCGCTC TGGAGCGCCG TGCATCTGAA GCTGCCCGTC ACGTTCGTGA TCCTGAACAA CGCGCGCTAC GCGGCGCTGC AGGATTTCGC GCCCGTGTTC GGCTTTCGCG ACGGCGAGCC GGTGCAGGGC ACCGCGCTGC CCGGTCTCGA TTTCGTGTCG CTCGCGCGCG GGTTCGGTTG CGACGGCGTG CGCGTGAGCG ACGCGGCGCG CTTGCGCGAC GCGCTCGAGC AGGCGCTCGC GTCGCCCGTG CCGGTCGTCG TCGACGTCGA CGTCGCGTGA
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Protein sequence | MTPPDLRADA PARAPYTVRD AVIDLLRRFG IRKVFGNPGS TELPMFRNFP DDFEYVLGLH EAVAVGMADG YAQASGNAAV VNLHSAAGVG NAMGVLFTAY RNKTPLVVTA GQQARSILPF EPFLASVQAA ELPKPYVKWS IEPARAEDVP AAIARAYHVA MQEPRGPVFV SIPADDWDRP AEPMPARTVS SEVRPAPEAL ARLGDALDAS ERPAFVVGAA VARAGAWDDA VRLAERHRAR VYAAPMSGRC SFPEDHPLFA GFLPPIRERI VEQLAGHDFI LAFGAPVFTY HIEGFGPHVP AGAALHQLVD DPSVAAWTPV GDAVVGNLRL AARDLLARAA PRERPMPAPR APRGRVGPGA PGERMPVAFA LQTLADVRGS RDVVVEEAPS ARPAMHEHLP FSSADTFYTM DSGGLGYGMP AALGIALGSP GRRVIALIGD GSSLYSIQAL WSAVHLKLPV TFVILNNARY AALQDFAPVF GFRDGEPVQG TALPGLDFVS LARGFGCDGV RVSDAARLRD ALEQALASPV PVVVDVDVA
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