Gene BMASAVP1_A0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A0605 
Symbol 
ID4681902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp614223 
End bp615674 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content69% 
IMG OID639844880 
Productserine protease 
Protein accessionYP_991952 
Protein GI121600278 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGTCG CCGCGGCGTT GTCGGCAGGC TATGTGGCGG GCACCCGCCG GGCGGAGCCG 
CAGATCATCA CGCCGGCGGT CGCCGCGCTG ATGCCGGCCG AGGCGGCCGC GAAGACGGGC
ATTCCCGATT TTTCCGGGCT GGTCGAGACC TACGGGCCGG CCGTCGTGAA CATCAGCGCG
AAGCACGTCG TGCAGCGCGC CGCGCAGCGT CGCGCGGCGC CGCAGTTGCC GATCGACCCG
GACGATCCGT TCTATCAATT CTTCCGACAT TTCTACGGGC AGATTCCCGG GATGGGCGGC
GGCCGCCAGC CGCAGCCGGA CGACCAGCCG AGCACGAGCC TCGGCTCCGG CTTCATCATC
AGCGCCGACG GGTATATCCT GACTAACGCG CACGTGATCG ACGGTGCGAA CGTCGTGACC
GTGAAGCTCA CCGACAAGCG CGAGTACAAG GCGAAGGTCG TCGGCGCCGA CAAGCAGTCC
GACGTCGCGG TGCTGAAGAT CGACGCTTCG GGCCTGCCGA TCGTGAAGAT CGGCGATCCG
GCGCAGAGCA AGGTCGGCCA GTGGGTCGTC GCGATCGGCT CGCCGTACGG GTTCGACAAC
ACGGTCACCT CGGGCATCAT CAGCGCGAAG TCGCGTGCGT TGCCCGACGA GAACTACACG
CCGTTCATCC AGACCGACGT GCCCGTGAAC CCCGGCAACT CGGGCGGCCC GCTGTTCAAC
CTGAACGGCG AGGTGATCGG CATCAACTCG ATGATCTACT CGCAGACGGG CGGCTTCCAG
GGGCTGTCGT TCGCGATCCC GATCAACGAG GCGATGAAGG TGAAGGACGA GCTCGTGAAG
ACGGGCCACG TGAGCCGCGG CCGGCTCGGC GTCGCCGTGC AGGGGCTCAA TCAGACGCTC
GCGAGTTCGT TCGGCTTGCA AAAGCCCGAC GGCGCGCTCG TCAGCTCGGT CGATCCGAAG
GGGCCGGCCG CGAAGGCCGG GCTGCAGCCG GGCGACGTGA TCCTCGCGGT CGACGGCGTG
CCGGTTCAGG ATTCGTCGAC GCTGCCCGCG CAGATCGCGG GCATGAAGCC GGGCACGAAG
GCCGATCTGC AGATCTGGCG CGACAAGTCG AGGAAGACGG TATCGGTGAC GCTCGCGTCG
CTCGCCGACG ATCAGGCGAA GGCGGGCGCC GACGAGCCCG TCGAGCAGGG GCGGCTCGGC
GTCGCGGTGC GCCCGCTGTC GCCGCGCGAG CGCAACGGCT CGTCGCTCAC GCACGGCCTG
GTCGTCCAGC AATCGGCGGG GCCTGCCGCG AGCGCGGGCA TCCAGCCCGG CGACGTGATT
CTCGCGGTGA ACGGGCGGCC CGTCACGAGC GCCGAACAAT TGCGCGACGC GGTCAAGCGC
GCGGGCAACA GTCTTGCGCT GCTGATCCAG CGTGACGATG CCCAGATTTT CGTGCCGGTC
GATCTGGGCT GA
 
Protein sequence
MAVAAALSAG YVAGTRRAEP QIITPAVAAL MPAEAAAKTG IPDFSGLVET YGPAVVNISA 
KHVVQRAAQR RAAPQLPIDP DDPFYQFFRH FYGQIPGMGG GRQPQPDDQP STSLGSGFII
SADGYILTNA HVIDGANVVT VKLTDKREYK AKVVGADKQS DVAVLKIDAS GLPIVKIGDP
AQSKVGQWVV AIGSPYGFDN TVTSGIISAK SRALPDENYT PFIQTDVPVN PGNSGGPLFN
LNGEVIGINS MIYSQTGGFQ GLSFAIPINE AMKVKDELVK TGHVSRGRLG VAVQGLNQTL
ASSFGLQKPD GALVSSVDPK GPAAKAGLQP GDVILAVDGV PVQDSSTLPA QIAGMKPGTK
ADLQIWRDKS RKTVSVTLAS LADDQAKAGA DEPVEQGRLG VAVRPLSPRE RNGSSLTHGL
VVQQSAGPAA SAGIQPGDVI LAVNGRPVTS AEQLRDAVKR AGNSLALLIQ RDDAQIFVPV
DLG