| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0582 |
|---|
| Symbol | |
|---|
| ID | 4680620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 590819 |
|---|
| End bp | 592537 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639844857 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_991929 |
|---|
| Protein GI | 121599175 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.10883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCA AATCGTCGTT TGCCGTCCTG CTGTGCGCGG CGCTCGCCTT GCCGCCCGGC
GGCCACGCGC AGTCGCGCGG CGATGCGCCG CCGCTCGAAT CCGCGCGCGC CGCCGGCGCC
GAGGACGCCG CGGCGCGCGC GCGCGATGCG CTGTCCACGG TGCCGTCCGG CATCGCGCCC
GGCGTGTTCG GCATGTACGG CGGCGCGCAG AGCCGGCTTG CCGATCCGGC GTCGGGCACG
CCCAGTTTGC GCGCGCCGCT TCGCTCGTTG CAACTGCCCG ATCTCGGCGA CGGCTCGGGC
GGCTCGCTGA CGCCGCAAGC GGAGCGCCGG CTCGGCGAGC GCGTGATGCG CGAGGTGCGG
CGCGATCCCG ACTATCTCGA CGACTGGCTC GTGCGCGACT ACCTGAATTC CGTCGCGGCG
AAGCTCTCCG CGGCCGCCGC CGCGCAGTTC ATCGGCGGCT ACATGCCCGA TTTCGAGCTG
TTCGCGATGC GCGATCCGCA GATCAACGCG TTCTCGCTGC CGGGCGGTTT CATCGGCATC
AACAGCGGGC TCGTCGCGGC GACGCAGACG GAGTCCGAAC TCGCGTCGGT GATTGGCCAC
GAGATGGGGC ATGTGCTGCA GCGGCACATC GCGCGGATGA TCGGCGCGAG CGAGAAGAGC
GGCTATGCGG CGCTCGCGAC GATGCTGTTC GGCGTGCTCG CGGGCATTCT CGCGCGCAGC
GGCGATCTCG GCAGCGCGAT CGCGATGGGC GGCCAGGCGT TCGCGGTCGA CAGCCAGCTC
AGGTTCTCGC GCTCGGCCGA GCGTGAGGCG GACCGCGTCG GCTTCCAGTT GCTCGCGGGC
GCCGGCTACG ATCCGTACGG CATGCCGGGC TTCTTCGAGC GGCTCGAGCG TGCGTCGGTG
GGCGACGCGG GCGTGCCCGC GTACGCGCGC ACGCACCCGC TGACGGGCGA GCGGATCGCC
GACATGGACG ACCGCGCGCG GCGCGCGCCG TACCGGCAGC CGCGGCAATC GGCGGAATAC
GGTTTCGTGC GCGCGCGCCT GCGGATGCTG CAGAACCGCG CGCCGACCGA TTACGCGAAC
GAGGCAAGAC GAATGCGCGC GGAGCTCGAC GATCGCGTCG CGCCGAATGT CGCGGCGAAC
TGGTATGGGA TCGCGCTCGG CGAGATGCTG GGCGGCCGCT ACGATGACGC GGACCGCGCG
CTCGCCGCGG CGCGCGATGC GTTCGCGCGC ACGGCCGCGC GCGAGGGCGA GGCGGCGCGC
ACTTCGCCGA GCCTCGACGT GCTCGCGGCG GAGATCGCGC GTCGCGCCGG CCGCGGGGAC
GACGCGGTGC GGCTCGCCGC CGCCGCGCAG GCGCGCTGGC CGGGTTCGCA CGCGGCTATC
GCCGCGCATT TGCAGGCGCT TCTCGCCGCG CGGCGTTACG GGCAGGCGCA GGCGCTCGCA
CAAGCGGAGG CGAACGCGGC CCCCCGCCAG CCCGATTGGT GGAACTATCT CGCGCAGGCG
AGCCTCGGCC GGGGCGATGC GCTCACGCAG CGCCGCGCGC TCGCGGAGAA GTTCGCGCTC
GAAGGCGCGT GGCCGTCGGC GATCCGGCAA CTGCGCGAGG CGCGCGATCT CAAGTCGGCC
GGTTTCTACG AGCAGTCGAT CATCAGCGCG CGGCTGCACG AATTCGAGGC ACGCTACAAG
GAAGAGCGGG AAGAGGACAA GGACGATCGG CGCGGTTGA
|
|---|
| Protein sequence | MRVKSSFAVL LCAALALPPG GHAQSRGDAP PLESARAAGA EDAAARARDA LSTVPSGIAP
GVFGMYGGAQ SRLADPASGT PSLRAPLRSL QLPDLGDGSG GSLTPQAERR LGERVMREVR
RDPDYLDDWL VRDYLNSVAA KLSAAAAAQF IGGYMPDFEL FAMRDPQINA FSLPGGFIGI
NSGLVAATQT ESELASVIGH EMGHVLQRHI ARMIGASEKS GYAALATMLF GVLAGILARS
GDLGSAIAMG GQAFAVDSQL RFSRSAEREA DRVGFQLLAG AGYDPYGMPG FFERLERASV
GDAGVPAYAR THPLTGERIA DMDDRARRAP YRQPRQSAEY GFVRARLRML QNRAPTDYAN
EARRMRAELD DRVAPNVAAN WYGIALGEML GGRYDDADRA LAAARDAFAR TAAREGEAAR
TSPSLDVLAA EIARRAGRGD DAVRLAAAAQ ARWPGSHAAI AAHLQALLAA RRYGQAQALA
QAEANAAPRQ PDWWNYLAQA SLGRGDALTQ RRALAEKFAL EGAWPSAIRQ LREARDLKSA
GFYEQSIISA RLHEFEARYK EEREEDKDDR RG
|
|---|
| |