| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0566 |
|---|
| Symbol | sodB |
|---|
| ID | 4680013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 577494 |
|---|
| End bp | 578072 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639844842 |
|---|
| Product | superoxide dismutase |
|---|
| Protein accession | YP_991914 |
|---|
| Protein GI | 121598701 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0641217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCATA CGCTCCCGCC GCTGCCGTAC GCTGAAGACG CCCTCGCTCC GCATATCTCG
CAGGAGACGA TCCAGTTTCA CTACGGCAAG CATCACCAGG CTTATGTGAC GAACCTGAAC
AACCTGATCC CCGGCACCGA GTTCGAGAAC CTGCCGCTGG AAGAGATCGT GAAGAAGTCG
TCGGGCGGCA TCTTCAACAA CGCCGCGCAG ATCTGGAATC ACACGTTCTT CTGGAACAGC
CTGTCGCCGA ACGGCGGCGG CGCGCCGACG GGCGCGCTCG GCGACGCGAT CAACGCGAAG
TGGGGTTCGT TCGACGCGTT CAAGGAGGCG TTCACGAAGG CAGCGGTCGG CACGTTCGGC
TCGGGCTGGG CTTGGCTCGT GAAGAAGGCG GACGGCTCGC TCGACATCGT GTCGACGAGC
AATGCGGCCA CGCCGCTCAC GACGGCCGAC AAGCCGCTCG TCACGATCGA CGTGTGGGAA
CACGCTTACT ACATCGATTA CCGCAACGCG CGCCCGAAGT TCGTCGAAGC GTTCTGGAAC
ATCGTGAACT GGGACTTCGC CGCGAAGAAC TTCGCGTAA
|
|---|
| Protein sequence | MAHTLPPLPY AEDALAPHIS QETIQFHYGK HHQAYVTNLN NLIPGTEFEN LPLEEIVKKS
SGGIFNNAAQ IWNHTFFWNS LSPNGGGAPT GALGDAINAK WGSFDAFKEA FTKAAVGTFG
SGWAWLVKKA DGSLDIVSTS NAATPLTTAD KPLVTIDVWE HAYYIDYRNA RPKFVEAFWN
IVNWDFAAKN FA
|
|---|
| |