Gene BMASAVP1_A0494 details

Gene Information

• Locus tag: BMASAVP1_A0494
• Symbol: hrcA
• ID: 4679792
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 495148
• End bp: 496305
• Gene Length: 1158 bp
• Protein Length: 385 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639844771
• Product: heat-inducible transcription repressor
• Protein accession: YP_991843
• Protein GI: 121598498
• COG category: [K] Transcription
• COG ID: [COG1420] Transcriptional regulator of heat shock gene
• TIGRFAM ID: [TIGR00331] heat shock gene repressor HrcA

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGCAT TACACCATAG CTCGATGACG AAAAGAACCG CCCGCCGGCG GCCGGCCGGC 
AAAACGGGCG CGGGGGCGGC GAGGCGCGCA AGCGGCGCTC GCGGGCGCCG CCCGGTTGCG 
CTAAAATTTT CCATCATGTT AGATCCACGC GCACGAACCC TCCTCAAGAC ACTGATCGAG 
CGGTATATCG CCGACGGTCA GCCGGTCGGA TCGCGCACGT TGTCTCGTTA TTCCGGGCTC 
GAGCTGAGCC CGGCGACGAT CCGCAACGTG ATGTCCGATC TGGAGGAGCT CGGCCTCGTG 
TCGAGCCCGC ATACGTCGGC CGGCCGGGTA CCGACGCCGC GCGGCTACCG GCTGTTCGTC 
GACACGATGC TGACCGTCGA GTCGCCGATC GATTCCGACG CGGTCACGCG GCTCGTGCAG 
ACCACGCTGC AGGCGGGCGA GCCGCAGCAG CGGGTCGTCG CGGCCGCGGC GAGCGTGCTG 
TCGAACCTGT CGCAGTTCGC GGGCGTCGTG CTCACGCCGC GCCGCAGCCA CGTGTTCAAG 
CAGATCGAAT TCCTGCGCCT GTCGGACAAG CGGATCCTCC TCATCATCGT GACGCCCGAA 
GGCGACGTGC AGAACCGCAT GATCGCGACG CAGCGCGACT ACGCGCCCGC GCAGCTCACC 
GAGGCGTCGA ACTACATCAA CGCGCACTTC GCCGGCCTGT CGTTCGACGA GGTGCGCCGC 
CGGCTGCGCG AGGAAATCGA TCAGCTGCGC GGCGACATGA CGGCGCTGAT GCACGCGGCC 
GTCACGGCGA GCACCGAGGA GCCCGACGAC GAGGAAACCG TGCTGATCTC CGGCGAGCGC 
AACCTGCTCG AGGTGGCCGA TCTGTCGTCC GACATGGCGC GCCTGCGCAA GCTGTTCGAC 
GTGTTCGACC AGAAGACGAG CCTGCTGCAA CTGCTCGACG TGTCGAGCCA CGCGCAAGGG 
GTGCAGATCT TCATCGGCGG CGAATCGACG CTCGTGCCGA TCGACGAGAT GAGCGTCGTG 
ACCGCGCCGT ACGAGGTCAA CGGCAAGATC GTCGGCACGC TCGGCGTGAT CGGCCCGACG 
CGCATGGCTT ACAACCGCGT GATTCCGATC GTCGACATCA CCGCGCGCCT GCTGTCGCTC 
ACGCTCAGCC AGCAGTAA 

 

Protein sequence

MPALHHSSMT KRTARRRPAG KTGAGAARRA SGARGRRPVA LKFSIMLDPR ARTLLKTLIE 
RYIADGQPVG SRTLSRYSGL ELSPATIRNV MSDLEELGLV SSPHTSAGRV PTPRGYRLFV 
DTMLTVESPI DSDAVTRLVQ TTLQAGEPQQ RVVAAAASVL SNLSQFAGVV LTPRRSHVFK 
QIEFLRLSDK RILLIIVTPE GDVQNRMIAT QRDYAPAQLT EASNYINAHF AGLSFDEVRR 
RLREEIDQLR GDMTALMHAA VTASTEEPDD EETVLISGER NLLEVADLSS DMARLRKLFD 
VFDQKTSLLQ LLDVSSHAQG VQIFIGGEST LVPIDEMSVV TAPYEVNGKI VGTLGVIGPT 
RMAYNRVIPI VDITARLLSL TLSQQ