| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0474 |
|---|
| Symbol | murD |
|---|
| ID | 4680014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 467556 |
|---|
| End bp | 469070 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639844751 |
|---|
| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
|---|
| Protein accession | YP_991823 |
|---|
| Protein GI | 121599228 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGAG ATCGGCAGCG GCCGATGGTG CTCGTGCTGG GGCTCGGCGA ATCGGGCCTC
GCGATCGCGC GGTGGTGCGC GAGGCACGGG TGCCGGTTGC GCGTCGCCGA TACGCGCGAG
ACGCCGCCCA ACCTGGCCGC GCTGACGGCG GCGGGCGTCG ATTTCGAATT CGTCGGCGGC
GCGTTTTCGC CGGCGCTCGT CGACGGCGGG ATCGAGCTTG TCGCGCTGAG CCCCGGCCTG
TCGCCGCTCG CGGAGGATCT CGCGCCGCTC GTCGCCGCCG CACGCGAGCG CGGCATTCCC
GTGTGGGGCG AGCTCGAATT CTTCGCGCAG GCGCTCGCGG CGCTCGGCGC GAACGGCTAC
GCGCCGAAGG TGATCGCGAT CACCGGCACG AACGGCAAGA CGACGACGAC GAGCCTCGCG
GGCTTGCTGT GCGAGCGCGC GGGCAAGAAG GTCGCGGTCG CGGGCAACAT CAGCCCGGCG
ATGCTCGACA AGCTGACCGA AGCGATCGAC GCGGCGGCGC TGCCGGACGT GTGGGTGCTC
GAGCTGTCGA GCTTTCAGCT CGACACCGCG CACACGTTCG CGCCCGATGC GGCAACGATC
CTCAACATCA CGCAGGACCA TCTCGACTGG CACGGCGGCT TCGCCGCGTA TGCGGCCGCG
AAGGGCCGCG TCTTCGGGCC GCGCACGGTG CGCGTGCTCA ATCGCGACGA TGCCGAGGTG
ATGCGCTTCG CGCCGCCCGC CGCGGCCGCC GACGCGCCGC GCGCGGTCAC GTTCGGCCTG
AACGAGCCGG CCGCCGACGG CGATTACGGC CTGCTGCGCG AAAACGGCAT CGCATGGCTC
GTCGAGGCGA TCGATCGCGA CGGGGCCGAT GCGCCCGCCG CGCCGTCGCG CCGGCGCAAG
CAGGAGGCGG CGAATCCGCC CGACATCGCG CTCAAGCGGC TGATGCCCGC CGACGCGTTG
CGCATCCGCG GGCTGCACAA CGCGGCGAAC GCGCTCGCCG CCTATGCGCT CGCGCGCGCG
ATCGGCCTGC CGGCCGCGCC GCTCCTGCAC GGCTTGCGCG AATACCGCGG CGAGCCGCAC
CGCGTCGAAG TGATCGCGAC GCTCGACGGC GTCGACTATG TCGACGACAG CAAGGGCACG
AACGTCGGCG CGACGGTCGC GGCGCTCGAC GGCCTCGCGC AGCGTGCGGT GCTGATCGCG
GGCGGCGACG GCAAGGGGCA GGATTTCGAG CCGCTCGCGG CGCCCGTCGC GCGCTGGTGC
CGCGCGGTGA TGCTGATCGG CCGCGACGCG CCCGCGTTGC GCGAGGCGCT TGCCGACACG
GGCGTGCCGC TTGCCGATCA CGCGACGCTC GAAGCCGCGG TGCGCGCGGC GAGCGCGCTC
GCGCAGCCGG GGGACGCGGT GCTGCTGTCG CCCGCGTGCG CGAGCCTCGA CATGTTCCGC
AATTACGCAC ACCGGGCCGA CGTGTTCCGC AGCGCGGTCG AAGATATCGC CTTGGAAAAA
GGAACGACGC TATGA
|
|---|
| Protein sequence | MFGDRQRPMV LVLGLGESGL AIARWCARHG CRLRVADTRE TPPNLAALTA AGVDFEFVGG
AFSPALVDGG IELVALSPGL SPLAEDLAPL VAAARERGIP VWGELEFFAQ ALAALGANGY
APKVIAITGT NGKTTTTSLA GLLCERAGKK VAVAGNISPA MLDKLTEAID AAALPDVWVL
ELSSFQLDTA HTFAPDAATI LNITQDHLDW HGGFAAYAAA KGRVFGPRTV RVLNRDDAEV
MRFAPPAAAA DAPRAVTFGL NEPAADGDYG LLRENGIAWL VEAIDRDGAD APAAPSRRRK
QEAANPPDIA LKRLMPADAL RIRGLHNAAN ALAAYALARA IGLPAAPLLH GLREYRGEPH
RVEVIATLDG VDYVDDSKGT NVGATVAALD GLAQRAVLIA GGDGKGQDFE PLAAPVARWC
RAVMLIGRDA PALREALADT GVPLADHATL EAAVRAASAL AQPGDAVLLS PACASLDMFR
NYAHRADVFR SAVEDIALEK GTTL
|
|---|
| |