Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0455 |
Symbol | pilD |
ID | 4681643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 447693 |
End bp | 448607 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639844732 |
Product | type IV pilus prepilin peptidase PilD |
Protein accession | YP_991804 |
Protein GI | 121598463 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCCA ATCCGTTCCT TTCCGGCTCG CCCGAACATG CGGCGGCGGC CGGGCCGCTC GCCGCATTCG CGGCGCTCCC CACGGGCATG CAGCTTGCGT TCGCGATCGT GCTCGGCCTC GTCGTCGGCA GCTTCATCAA CGTCGTCGTC CATCGGCTGC CGATCATGAT GAAGCGCGCG TGGCTCGCCG AAATCGCCGA AGCGACGGGC GCGCCGTGCG CCGACGACGG CCTGCCGGCG CGCTACAACC TCTGCGTGCC GCGCAGCGCG TGCCCGCACT GCGGCCATGC GCTGCGCGCG TGGGAAAACG TGCCGGTCCT CAGCTATATC GCATTGCGGG GCCGGTGCCG GCACTGCCGT ACGCCGATCG GCGCGCGCTA TCCGCTCATC GAACTCGCGA GCGGCGCGCT CGCCGCCGGC GCGCTCGCGC TGTTCGGGCC GAGCGGCGCC GCACTCGCCG CGTTCGGCCT GTGCGCGGCG CTCCTCGCGA TGAGCGCGAT CGACATGCAG ACCGGCTTCC TGCCCGATTC GCTCACGTTG CCGCTCCTGT GGGCCGGGCT GTGCGTCAAT CTCTGGGGCA CGTTTGCGAG CCTGCGCGCC GCGGTGATCG GCGCGATCGC CGGCTATCTG TTCCTCTGGT GCATTCTGTG GCTCTTCAAA CTGCTGCGCG GCATCGAAGG AATCGGCTAC GGCGACCTGA AGCTCCTCGC CGCGCTCGGC GCATGGCTCG GCTGGGAAGC ATTGCCGCAG GTCGTGCTGA TCGCAGCGGT CGCCGGCGCC GCGGTCGGTC TCGTCGCAAC CTGGCGCGGC CGCATGCGCT TCGAGGAACC GTTGCCATTC GGCCCGTTCC TCGCGGCGGG CGGCGCCGCG ACCCTCTTTT TCGGCACGCC GTTCTACCTG CTGCTCGGAG GCTGA
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Protein sequence | MTPNPFLSGS PEHAAAAGPL AAFAALPTGM QLAFAIVLGL VVGSFINVVV HRLPIMMKRA WLAEIAEATG APCADDGLPA RYNLCVPRSA CPHCGHALRA WENVPVLSYI ALRGRCRHCR TPIGARYPLI ELASGALAAG ALALFGPSGA ALAAFGLCAA LLAMSAIDMQ TGFLPDSLTL PLLWAGLCVN LWGTFASLRA AVIGAIAGYL FLWCILWLFK LLRGIEGIGY GDLKLLAALG AWLGWEALPQ VVLIAAVAGA AVGLVATWRG RMRFEEPLPF GPFLAAGGAA TLFFGTPFYL LLGG
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