Gene BMASAVP1_A0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A0455 
SymbolpilD 
ID4681643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp447693 
End bp448607 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content71% 
IMG OID639844732 
Producttype IV pilus prepilin peptidase PilD 
Protein accessionYP_991804 
Protein GI121598463 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCCA ATCCGTTCCT TTCCGGCTCG CCCGAACATG CGGCGGCGGC CGGGCCGCTC 
GCCGCATTCG CGGCGCTCCC CACGGGCATG CAGCTTGCGT TCGCGATCGT GCTCGGCCTC
GTCGTCGGCA GCTTCATCAA CGTCGTCGTC CATCGGCTGC CGATCATGAT GAAGCGCGCG
TGGCTCGCCG AAATCGCCGA AGCGACGGGC GCGCCGTGCG CCGACGACGG CCTGCCGGCG
CGCTACAACC TCTGCGTGCC GCGCAGCGCG TGCCCGCACT GCGGCCATGC GCTGCGCGCG
TGGGAAAACG TGCCGGTCCT CAGCTATATC GCATTGCGGG GCCGGTGCCG GCACTGCCGT
ACGCCGATCG GCGCGCGCTA TCCGCTCATC GAACTCGCGA GCGGCGCGCT CGCCGCCGGC
GCGCTCGCGC TGTTCGGGCC GAGCGGCGCC GCACTCGCCG CGTTCGGCCT GTGCGCGGCG
CTCCTCGCGA TGAGCGCGAT CGACATGCAG ACCGGCTTCC TGCCCGATTC GCTCACGTTG
CCGCTCCTGT GGGCCGGGCT GTGCGTCAAT CTCTGGGGCA CGTTTGCGAG CCTGCGCGCC
GCGGTGATCG GCGCGATCGC CGGCTATCTG TTCCTCTGGT GCATTCTGTG GCTCTTCAAA
CTGCTGCGCG GCATCGAAGG AATCGGCTAC GGCGACCTGA AGCTCCTCGC CGCGCTCGGC
GCATGGCTCG GCTGGGAAGC ATTGCCGCAG GTCGTGCTGA TCGCAGCGGT CGCCGGCGCC
GCGGTCGGTC TCGTCGCAAC CTGGCGCGGC CGCATGCGCT TCGAGGAACC GTTGCCATTC
GGCCCGTTCC TCGCGGCGGG CGGCGCCGCG ACCCTCTTTT TCGGCACGCC GTTCTACCTG
CTGCTCGGAG GCTGA
 
Protein sequence
MTPNPFLSGS PEHAAAAGPL AAFAALPTGM QLAFAIVLGL VVGSFINVVV HRLPIMMKRA 
WLAEIAEATG APCADDGLPA RYNLCVPRSA CPHCGHALRA WENVPVLSYI ALRGRCRHCR
TPIGARYPLI ELASGALAAG ALALFGPSGA ALAAFGLCAA LLAMSAIDMQ TGFLPDSLTL
PLLWAGLCVN LWGTFASLRA AVIGAIAGYL FLWCILWLFK LLRGIEGIGY GDLKLLAALG
AWLGWEALPQ VVLIAAVAGA AVGLVATWRG RMRFEEPLPF GPFLAAGGAA TLFFGTPFYL
LLGG