| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0454 |
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| Symbol | pilC |
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| ID | 4681267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 446431 |
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| End bp | 447648 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639844731 |
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| Product | type IV pilus biogenesis protein PilC |
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| Protein accession | YP_991803 |
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| Protein GI | 121599735 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAC GCGGACCGGC TTCGCCGATC GAGTCCCGAT ACCGTTGGGC GGGCGTGACG
ATCGACGGCG CGCGGCGGCG CGGCATGTTG ATCGCCGTCG ATCCGTCCGC TGCGCGCGCG
GCGCTCAAGC GCACGGGCGT CACCGTGCTG CGCCTCGAAG CGCGCGGCCG GGCGCCGCAG
CCCGCCGCAC GGGCGAGCGA AGTCACCCGT TTCGCGCGGC AGCTCGCGGG ACTCCTGCAC
GCGGGGCTCG CGCTTGCGCC GTCGCTCGAA CTGCTCGCGC AAGCGACGCA GCGAAGCGAA
ATGCCCCGCG TCGCGGCGGG CCTCGCGCGC GAGATCGTGG CGGGACGGCA GTTCTCCGCC
GCGCTGCGCC GCTACCCGCG CCAGTTCGAT CCGTTTTTCT GTCAACTGGT CGCAGTCGGC
GAAACGGCGG GAGCGCTCGC CGCGGTGCTC ACACGGCTCG CCGACGATCG CGAGCGTGCA
GCCGCGCAAT ATGCGCGCGT CAAAGGCGCG CTCGCTTACC CAGCCACCGT GCTGCTGTTC
GCGCTCGCGA TCACCGCCGC ATTGCTGGTC TGGGTGGTGC CCACGTTCGA ACAGATCTTC
GCGGGCTTCG GCGCCCCGCT GCCTGCGCCG ACCCGTTTCG TCCTCGCGCT GTCGGCCGGC
GTGACGCGCT GGAGCGCGCC TGCCGCCGCG GCCACGCTAT TCGCCTGCGT TGCCGTTCGC
CATACGGCGC GCCGTTCCGC AGCCGCGCGC GTCGCGCTCG CACGGACGCT GCTGCGCGCG
CCGTTCGTCG GGCCGCTCGT GCAGACGCTC GCCGCCGCCC GATGGAGCCG CGCGCTCGGC
ACGTTGCTCG CCGCCGGCAC GCCGCTCACC GACGCATTCG CGGCGCTGTC GAACGCGACC
GGCAACCCGC GTTTCGATCT CGCGACAGCC GGCATCGCCG CGCGGGTGCT GCATGGCGAA
CGGCTCGCCC GCGCGATGCG CGCCGAAGGC TGCTTCCCTG ACGATCTCGT CCAGCCGATC
GCCGTCGCCG AGGAATCGGG CACGCTGGAC ACAATGCTCA TCGACGCCGC GACACTCTGC
GATCGCCGCG TCGACGAACG GATCAGCGCG CTCGCGAACC TGTGCGAACC CGTCGTGATC
GTCGTGCTGG GCGCGCTGAT CGGCGCGCTC GTCGTCGCGA TGTACTTGCC GATCGTCCAG
CTCGGCAACG TGGTGTAG
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| Protein sequence | MSTRGPASPI ESRYRWAGVT IDGARRRGML IAVDPSAARA ALKRTGVTVL RLEARGRAPQ
PAARASEVTR FARQLAGLLH AGLALAPSLE LLAQATQRSE MPRVAAGLAR EIVAGRQFSA
ALRRYPRQFD PFFCQLVAVG ETAGALAAVL TRLADDRERA AAQYARVKGA LAYPATVLLF
ALAITAALLV WVVPTFEQIF AGFGAPLPAP TRFVLALSAG VTRWSAPAAA ATLFACVAVR
HTARRSAAAR VALARTLLRA PFVGPLVQTL AAARWSRALG TLLAAGTPLT DAFAALSNAT
GNPRFDLATA GIAARVLHGE RLARAMRAEG CFPDDLVQPI AVAEESGTLD TMLIDAATLC
DRRVDERISA LANLCEPVVI VVLGALIGAL VVAMYLPIVQ LGNVV
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