Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0453 |
Symbol | |
ID | 4681687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 445211 |
End bp | 446434 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639844730 |
Product | type II/IV secretion system protein |
Protein accession | YP_991802 |
Protein GI | 121599911 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGTCCG CAGCATCCGC GCTGCCCCGG CCGCGCGCGC CCGAGCTCGC CGACGACGCA CCCGCGGTCG GTATCGTCGC CGACATGCTG CGCGCGGCCC ACGAGCGCGA TGCTTCCGAC ATCCATGTCG AGCCCTGTGA ATCCGGCTGG CGCGTGCGTC TGCGCATCGA CGGCGTGCTG CACGAGTTCG CGCGGCCGCC CGCTCATTTG CGCGACGCAT GCGTGACGCG CATCAAGGTA CTCGCGCGGA TGGACATCGC CGAGCGCCGC GTGCCGCAGG ACGGCCGGCT GCGGCTCCCG CTCGCGCCGG GGCGCGCGGG CGACTACCGC GTGAGCTCGC TGCCGACGCT GCATGGCGAG AAACTCGTGC TGCGGCGTCT GGAGACGCTG CCCGCCGATC TGTCGCTCGC CGCGCTCGGC TTCGACGCGG CTCAGGCACG CGGCGTCGAG GCGGCGATCG GCGCGCCGCA CGGTCTCATC CTCGTCACGG GGCCGACGGG CAGCGGCAAG ACGCTGTCAC TGTATTGCTT CCTGCAAATG CTGAACGACG TGTCGCGCAA CGTCTGCACG GTCGAGGATC CGGCCGAGAT CGAGCTCGAC GGCATCAACC AGGTCGGCGT GCGCGAGAAG GCGGGCCTCA CCTTCGCGGT CGCGCTGCGC GCGTTCCTGC GGCAGGATCC CGACGTCATC ATGGTCGGCG AGATACGCGA TGCGCAGACC GCCGACGTCG CGCTGAAAGC CGCGCAGACC GGGCACCTCG TGCTGTCGAC GCTGCACACG AATGACGCGC CCGCCGCGGT AGCCCGCCTG CTCGACATCG GCGTCGCGCC GTACAACCTC GCCGCCGCGC TGCGGCTCGT GACAGCGCAG CGGCTCGTGC GACGCCTGTG CCCCGCTTGC CGCGCGCCGT CGGACGCGTC GCCCGCCACA CTGCGCGCCG CGGGATTCGA CGCCGCGTCG ATCGACGCCG GCTGGCGCCC GTATGCCGCG AACGGATGCG CCGCATGCCA TGGAATCGGT TATCGGGGGC GCATCGGCAT CCATCAGGTG ATGCCGCTGT CCGCCGAGTT GCGCAACCTG ACCGTCGCGC GCGCGGGCAG CGCCGAACTC GCGCGACAAG CGCGCGCCGA AGGCATGGCG AGCCTGCGCG ATGCGGCACT CGCCCGCGTT CGCGACGGCA CGACGAGCTT GAGCGAAGCG CTCGCCACGA CGGAGGCGGC ATGA
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Protein sequence | MRSAASALPR PRAPELADDA PAVGIVADML RAAHERDASD IHVEPCESGW RVRLRIDGVL HEFARPPAHL RDACVTRIKV LARMDIAERR VPQDGRLRLP LAPGRAGDYR VSSLPTLHGE KLVLRRLETL PADLSLAALG FDAAQARGVE AAIGAPHGLI LVTGPTGSGK TLSLYCFLQM LNDVSRNVCT VEDPAEIELD GINQVGVREK AGLTFAVALR AFLRQDPDVI MVGEIRDAQT ADVALKAAQT GHLVLSTLHT NDAPAAVARL LDIGVAPYNL AAALRLVTAQ RLVRRLCPAC RAPSDASPAT LRAAGFDAAS IDAGWRPYAA NGCAACHGIG YRGRIGIHQV MPLSAELRNL TVARAGSAEL ARQARAEGMA SLRDAALARV RDGTTSLSEA LATTEAA
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