Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0417 |
Symbol | mpl |
ID | 4681121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 411108 |
End bp | 412520 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639844694 |
Product | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase |
Protein accession | YP_991767 |
Protein GI | 121598668 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATATCC ACATTCTCGG CATCTGCGGC ACCTTCATGG GCGGTCTGGC CGTGCTCGCA CGCGCGGCGG GGCATACCGT GACCGGCTGC GACGCGGGCG TCTATCCGCC AATGAGCACG CAACTCGAGG CGCAGGGTAT CCAGCTGATC GAAGGCTACG GCGCCGAACA GATCGATCTG AAGCCCGATC TGTTCGTGAT CGGCAACGTG GTCTCGCGCG GCAACCCGCT GATGGAGGCG ATTCTCGATC GCGGGCTGCC GTATGTATCG GGCCCGCAAT GGCTCGGCGA GCATGTGCTG GCGGGTAAGT GGGTGCTCGC TGTCGCCGGT ACGCACGGCA AGACGACGAC GAGCTCGATG CTCGCGTGGG TACTGGAAGA CGCCGGCCTG AATCCGGGTT TCCTGATCGG TGGCGTGCCG CTGAATTTCG GCGTGTCCGC ACAGTTGACC GATTCGAGCT TCTTCGTGAT CGAGGCGGAC GAGTACGACA CGGCGTTTTT CGACAAGCGC TCGAAATTCG TCCATTACCG GCCGCGGACC GCGATCCTGA ACAATCTCGA ATTCGATCAT GCGGACATCT TCCCGGATCT CGCCGCGATC GAGACGCAAT TCCATCATCT GGTGCGCACC GTGCCGGGCG TCGGCCGGCT CGTGACGAAC GGCCGCGACG ACGCGCTCGA GCGCGTGCTG TCGCGCGGCT GCTGGAGCGA CGTCGAGCGC TTCGGTGTCG ACGGCGGCTG GCAGGCGTTG CCTGTCGAGA ATGGCGTGCC GGTGGACGGG CGTTTCGCGG TGTATTGGCG CAGCGAGCGC GTCGGCGCCG TCGATTGGCA GGTGCAGGGC GAGCACAATC GGATGAACGC GCTCGCGGCG ATCGCCGCCG CGCGCCACGT CGGCGTGCCG CCCGCGCAGG CGGCCGCCGC ACTGGCCGCG TTTCGCAACG TCAAGCGCCG GATGGAGGTG CGCGGCAGCG TCGACGGGGT CACCGTCTAC GACGATTTCG CTCACCACCC CACCGCGATC GAAACGACGA TTGCCGGCCT TCGTACACGC ATCGGTCGCG AAAACACCCG CATCCTCGCG GTGCTGGAGC CGCGGTCGAA CACGATGAAG CTCGGCGTGA TGAAGGCGCA ACTGCCGGCG AGCCTGGCCG ATGCCGATCT CGTGTTCGGC TACGGCGCGC CGAGCGGCCG CGACGCGCTC GGCTGGAGCC TGCCCGACGC GCTTGCGCCG CTTGGCGGCA AGGCGCGCGC GTTCGACGAT CTGCATGCGC TCGTGAAGGC CGTGACCGCC TCGGCACGGC CGGGCGACCA CGTGCTCGTG ATGAGCAACG GCGGCTTCGG CGGCGTGCAC CAGAAGCTGC TCGACGCGCT GTCCGCCCGC GGCGACGCGG CGCCGGCCCG GAGCGGCGCG TGA
|
Protein sequence | MHIHILGICG TFMGGLAVLA RAAGHTVTGC DAGVYPPMST QLEAQGIQLI EGYGAEQIDL KPDLFVIGNV VSRGNPLMEA ILDRGLPYVS GPQWLGEHVL AGKWVLAVAG THGKTTTSSM LAWVLEDAGL NPGFLIGGVP LNFGVSAQLT DSSFFVIEAD EYDTAFFDKR SKFVHYRPRT AILNNLEFDH ADIFPDLAAI ETQFHHLVRT VPGVGRLVTN GRDDALERVL SRGCWSDVER FGVDGGWQAL PVENGVPVDG RFAVYWRSER VGAVDWQVQG EHNRMNALAA IAAARHVGVP PAQAAAALAA FRNVKRRMEV RGSVDGVTVY DDFAHHPTAI ETTIAGLRTR IGRENTRILA VLEPRSNTMK LGVMKAQLPA SLADADLVFG YGAPSGRDAL GWSLPDALAP LGGKARAFDD LHALVKAVTA SARPGDHVLV MSNGGFGGVH QKLLDALSAR GDAAPARSGA
|
| |