Gene BMASAVP1_A0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A0408 
Symbol 
ID4679684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp401169 
End bp401858 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content73% 
IMG OID639844685 
Product2-dehydro-3-deoxy-6-phosphogalactonate aldolase 
Protein accessionYP_991758 
Protein GI121600033 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATGG ATGCCGAAAC ACTGCGTTTT CCCGCGCCGT ATGCGCCGCA TCGCGCGCTG 
ATGCGCGCGT TCGGCGCGTG CCCGATGATC GCGATCCTGC GCGGCGTCAC GCCCGCCGAC
GCGGCGGCGC ACGGCGCCGC GCTGTATGAA GCGGGTTTTC GCATCGTCGA GGTGCCGCTC
AATTCGCCCG ATCCGTTCGA CAGTATCGCC GCGCTGCGCA CGGCGCTGCC GGCCGACGCG
ATCGTCGGCG CGGGCACCGT GCTGCGCGCC GGGCATGTCG ACGAAGTCGT GCGCGCGGGC
GGCGAGCTGA TCGTGATGCC GCATGCGGAC GGCGACGTCG TGCGCCGCGC GAAGACGCTC
GGCATCGGAT GCGCGCCCGG CGTCGCGACG CCGACCGAAG CGTTCGCCGC GCTCGCGAAC
GGCGCGGACG TGCTGAAGAT GTTTCCCGCC GAGCAGCTCG GCACGCCGGC CGTGAAGGCG
TGGCGCGCGG TGATCGACGC GCGCGTGCCG CTCGTGCCGG TCGGCGGGAT CACGCCGGAG
AACATGGGGC CGTATCTCGC GGCGGGCGCG AGCGGCTTCG GCCTCGGCTC GGCGCTGTAC
GCGCCCGGAC AGACGAGCGC CGTCACCGCC GTGCGCGCGC ACGCGTTCGT CAACGGATGG
CGGATCGCCC GCCACGGAGC GGCACGGTGA
 
Protein sequence
MSMDAETLRF PAPYAPHRAL MRAFGACPMI AILRGVTPAD AAAHGAALYE AGFRIVEVPL 
NSPDPFDSIA ALRTALPADA IVGAGTVLRA GHVDEVVRAG GELIVMPHAD GDVVRRAKTL
GIGCAPGVAT PTEAFAALAN GADVLKMFPA EQLGTPAVKA WRAVIDARVP LVPVGGITPE
NMGPYLAAGA SGFGLGSALY APGQTSAVTA VRAHAFVNGW RIARHGAAR