| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0406 |
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| Symbol | araF |
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| ID | 4681735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 399268 |
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| End bp | 400263 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639844683 |
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| Product | L-arabinose ABC transporter, periplasmic L-arabinose-binding protein |
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| Protein accession | YP_991756 |
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| Protein GI | 121598246 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCA GAACGTTCAT CACGTTGGCG GCAGCGGCGG CGGTCGCGGC GGCGGGCCTG
CCCGCGCAGG CGGCCGAGCC CGTGAAGATC GGCTTCCTCG TCAAGCAGCC CGAGGAGCCG
TGGTTCCAGG ACGAATGGAA ATTCGCCGAG CTCGCCGCGA AGGACAAGGG CTTCACGCTC
GTGAAGATCG GCGCGCCGTC CGGCGAGAAG GTGATGAGCG CGATCGACAA TCTCGCCGCG
CAGAAGGCGC AGGGCTTCAT CATCTGCACG CCGGACGTGA AGCTCGGGCC GGGCATCGTC
GCGAAGGCGA AGTCGCACGG CCTGAAGATG ATGACGGTCG ATGACCGGCT CGTCGACGGC
GCGGGCAAGC CGATCGAATC GGTTCCGCAC ATGGGCATTT CCGCGTACGA CATCGGCAAG
CAGGTCGGCG GCGGGATCGC GGCGGAGATC AAGAGGCGCG GCTGGAACAT GAACGAAGTC
GGCGCGATCG ACATCACGTA CGAGCAGTTG CCGACCGCGC ACGACCGCAC GACGGGCGCG
ACCGACGCGC TCGTCGCCGC GGGCTTTCCG AAGGCGAACG TGATTGCCGC GCCGCAGGCG
AAGACCGACA CCGAGAACGC GTTCAACGCG GCGAACATCG CGCTCACGAA GAATCCGAAG
TTCAAGCACT GGGTCGCCTA CGGCCTGAAC GACGAAGCGG TGCTCGGCGC GGTGCGCGCG
GCCGAAGGGC GCGGCTTCAA GGCGGCCGAC ATGATCGGCA TCGGCATCGG CGGCTCGGAC
TCGGCGCTCA GCGAGTTCAA GAAGCCGCAG CCGACCGGCT TCTTCGGCAC CGTGATCATT
AGCCCGAAGC GGCACGGCGA AGAGACTTCC GAGCTGATGT ACGCGTGGAT CACGCAAGGC
AAGGCGCCGC CGCCGCTCAC GCTGACGACG GGCATGCTCG CGACGCGCGA GAACGTCGCG
CAGGTGCGCG AGACGATGGG GCTCGCGGCG AAGTGA
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| Protein sequence | MKRRTFITLA AAAAVAAAGL PAQAAEPVKI GFLVKQPEEP WFQDEWKFAE LAAKDKGFTL
VKIGAPSGEK VMSAIDNLAA QKAQGFIICT PDVKLGPGIV AKAKSHGLKM MTVDDRLVDG
AGKPIESVPH MGISAYDIGK QVGGGIAAEI KRRGWNMNEV GAIDITYEQL PTAHDRTTGA
TDALVAAGFP KANVIAAPQA KTDTENAFNA ANIALTKNPK FKHWVAYGLN DEAVLGAVRA
AEGRGFKAAD MIGIGIGGSD SALSEFKKPQ PTGFFGTVII SPKRHGEETS ELMYAWITQG
KAPPPLTLTT GMLATRENVA QVRETMGLAA K
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