Gene BMASAVP1_A0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A0392 
Symbol 
ID4680875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp386206 
End bp386973 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content76% 
IMG OID639844669 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_991742 
Protein GI229008328 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCG CCGCCACGAC CGCGGCGGTG CCGCGCTTCT TCGTCGACGC GGCGTTGCGC 
GCCGACGCCA CGCTGGCGCT GCCGGCCGAC GTCGCGCGTC ACGCGCACGT GCTGCGGCTG
CAGCCGGGCG ACGCGCTCGC GCTGTTCGAC GGCACGGGCG GCCAGTATCG CGCGCGACTC
GTCGAGATCG ACAAGCGCGG CGCGCTCGCC CGGATCGATG CGTTCGAGCC CGCGGAAGCG
GAGCCGCCGT ACCGCGTGAC GCTCGCACAG GGCATCGCCG GCGGCGACAA GATGGATTGG
GTGATCGAAA AGGCGGTCGA GCTCGGCGTG GCGGCGGTTG TGCCGCTGTC GACCGCGCGC
GGCGTCGTCA GGCTGTCGGG CGAGCGCGCG GACAAGCGCG TGTCGCACTG GCGCGGCGTC
GTGCGCGCGT CGTGCGAGCA GTGCGGCCGC AATCGCTTGC CGGAAATCGC GCCGGTGCGC
GGCTTCGATG CATGGCTCGA CGCGCTGCCG GCCACGCCGG CCGACGGCGC ACTGCGCTTG
CTGCTGTCGC CGCGCGCGAG CGTGCCGTTC GCATCGCTGC CCGCCGCGCC GCCCGCCGGC
GACGTGACGC TGCTGATCGG CCCGGAAGGC GGGCTCGCGC CCGACGAGGA ACAAGCCGCG
CGAGCGCGAG GCTTCGCCGC GCTGTCGCTC GGCCCGCGCG TGCTGCGCAC CGAAACGGCG
GGCGCGGCGG TGCTCGCCGC GCTCGCGGCG CGCTGGGGCG GATGGTGA
 
Protein sequence
MSGAATTAAV PRFFVDAALR ADATLALPAD VARHAHVLRL QPGDALALFD GTGGQYRARL 
VEIDKRGALA RIDAFEPAEA EPPYRVTLAQ GIAGGDKMDW VIEKAVELGV AAVVPLSTAR
GVVRLSGERA DKRVSHWRGV VRASCEQCGR NRLPEIAPVR GFDAWLDALP ATPADGALRL
LLSPRASVPF ASLPAAPPAG DVTLLIGPEG GLAPDEEQAA RARGFAALSL GPRVLRTETA
GAAVLAALAA RWGGW