| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0300 |
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| Symbol | secF |
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| ID | 4678985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 298141 |
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| End bp | 299082 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639844578 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_991651 |
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| Protein GI | 121601113 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTT TCCGCATCCG TAAAGACATT CCGTTCATGC GGCACGCGTT GGTCTTCAAC
GTGGTCTCGC TCGTGACGTT CCTCTCCGCC GTGTTCTTCC TGTTCCATCG CGGGCTGCAT
CTGTCCGTCG AATTCACGGG CGGCACCGTG ATCGAAGTGC AGTACCAGCA GGCCGCGCAG
CTCGAACCCG TGCGCGCGAC GCTCGGCTAC GCCGACTCGC AGGTGCAGAA CTTCGGCACG
TCGCGCAACG TGCTGATTCG CCTGCCGCTC AAGCAGGGCC TCACGTCCGC GCAGCAGAGC
GACCAGGTGA TGGCCGCGCT GAAGGCGCAG AACGCCGACG TCGCGCTGCA GCGCGTCGAG
TTCGTCGGCC CGCAGGTCGG CCGCGAGCTC GCGACCGACG GCCTGCTCGC GCTCGCGTGC
GTCGTGATCG GCATCGTCAT CTATCTGTCG TTCCGCTTCG AATGGAAGTA CGCGGTCGCC
GGCATCATCG CGAACCTGCA CGACGTCGTG ATCATTCTCG GCTTCTTCGC GTTCTTCCAG
TGGGAGTTCT CGCTGTCGGT GCTGGCGGCG GTGCTCGCGG TGCTCGGCTA CTCGGTCAAC
GAATCGGTCG TCATCTTCGA CCGGATCCGC GAGACGTTCC GCCGCGAGCG CAAGATGACG
GTGCAGGAAG TGATCAACCA TGCGATCACG AGCACGATGT CGCGCACGAT CATCACGCAC
ACGTCGACGG AAATGATGGT GCTGTCGATG TTCTTCTTCG GCGGCCCGAC GCTGCACTAC
TTCGCGCTCG CGCTGACGGT CGGCATCATG TTCGGCATCT ATTCGTCGGT GTTCGTCGCC
GGCTCGCTCG CGATGTGGCT CGGCATCAAA CGCGAGGATC TCGTCAAGGA GAAGAAGTCC
GCGCACGATC CGAACGATCC GAACGCGGGC GCGCAGGTGT AA
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| Protein sequence | MEFFRIRKDI PFMRHALVFN VVSLVTFLSA VFFLFHRGLH LSVEFTGGTV IEVQYQQAAQ
LEPVRATLGY ADSQVQNFGT SRNVLIRLPL KQGLTSAQQS DQVMAALKAQ NADVALQRVE
FVGPQVGREL ATDGLLALAC VVIGIVIYLS FRFEWKYAVA GIIANLHDVV IILGFFAFFQ
WEFSLSVLAA VLAVLGYSVN ESVVIFDRIR ETFRRERKMT VQEVINHAIT STMSRTIITH
TSTEMMVLSM FFFGGPTLHY FALALTVGIM FGIYSSVFVA GSLAMWLGIK REDLVKEKKS
AHDPNDPNAG AQV
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