| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0251 |
|---|
| Symbol | |
|---|
| ID | 4680418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 254914 |
|---|
| End bp | 256458 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639844529 |
|---|
| Product | ISBma2, transposase |
|---|
| Protein accession | YP_991602 |
|---|
| Protein GI | 121599323 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3666] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.869228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAAG CCCGCGAGAC GCGGGCTCAG ATTGCTGACA AACCCTCGCC AAGTGGGGGA
TTTTTGTTTT TTAATGGCGT GATGCTGAAG ACGCCCATGC CCACGCAGCA CGAACTCGAG
ATGGTGACGC TCGAGGAACT CGTGCCGAAG GACCACCTGC TGCGCCAGAT CGATGCGGCG
GTGGATTTCG AGTTCATCCG CGCGAAGGTG GCGCATCTGT ATTGCGCGGA CAACGGGCGG
CCGGCGCTCG ATCCCGTGGT GATGTTCAAG CTGTTGTTCA TCGGCTACCT GTTCGGGGTG
CGCAGCGAGC GGCAACTGAT GCGTGAGGTC CAGGTCAACG TCGCCTATCG CTGGTTCGCC
CGGTTCCGGC TGACCGACAA GGTGCCGGAT GCGTCAACGT TCTCGCAGAA TCGCCGCCGA
CGCTTCACGG ACACGACGGT GTATCAGGAG ATCTTCGACG AGATCGTGCG GCAGGCGATC
AAGCGCGGGC TGGTCGACGG TCGGGTGCTG TACACGGACA GCACGCACCT GAAGGCGAAC
GCGAACAAAG GCAAGTTCGA TGTGGTGAAG CTGGAGCAGA CGCCGGCCGC CTACACGGAG
GCATTGAACG CGGCAGTGGA TGCGGACCGG GCCGCGCATG GCAGGAAGCC GCTGGATCGC
GACGACGATG AGCCGCCGTC TAGCAAGGAC ACCAAGCTCA GCCGGACCGA TCCGGACAGC
GGCTACATGG TGCGGGACGA CAAGCCGAAG AGGTTCTTCT ATCTGGACCA CCGCACGGTG
GATGCCAAGC ACGCGATCAT CACCGATACG CATGTGACGC CGGCCTCGGT GCATGACAGC
CAGCCGTATC TGGATCGGCT GGATCGCCAG CGCGAGCGCT TTGAGTTCAA GGTCGAGGCG
GTGGGGCTGG ATGCGGGCTA CTTCACGCCG GCGGTGTGCC AGGGGCTGGA GGAGCGAGGG
ATTGCCGGGG TGATGGGCTA TCGCACGCCG AACCACAAGC CGGGCATGTT CTACAAACGG
CAGTTCAAGT ACGACGCGTA TCGCAACGAA TACGTGTGCC CGCAGGGGCA GGCCCTGCCG
TACAGCACGA CCAATCGGCT CGGCTATCGG GAATACAAAT CCAATGCGCA GATCTGCGGG
CGCTGCCCGG TACGATCGCA GTGCACGAAC AGTGCGATCG CGGTGAAGGT GGTAACGCGC
CACGTGTGGG AGCGCGCCAA GGAGCGGGTG GACGCGCGGC GCTTGACCGA ATGGGGCCAA
CGCATTTACG CGCGGCGCAA GCAGACGGTG GAGCGCAGCT TCGCCGATGC CAAGCAGCTG
CATGGGCACC GTTATGCCCG TATGCGTGGG CTACGCAAGG TGGCCGAGCA GTGCTTGCTG
GCCGCGGCGG CACAGAACAT CAAGAAGATT GCGATGCTGC TGGCGCGGAA GCGGAAAAAG
GGGCCAGCGG GTCCCGATTG GCGCTTCGTG CGCATGCTGC TGCGTCTGGT GAGCGGTTTG
CGCTGCAGCT TCGACTACCC GCTCGCGGCG AACCCGCAAT CCTGA
|
|---|
| Protein sequence | MRKARETRAQ IADKPSPSGG FLFFNGVMLK TPMPTQHELE MVTLEELVPK DHLLRQIDAA
VDFEFIRAKV AHLYCADNGR PALDPVVMFK LLFIGYLFGV RSERQLMREV QVNVAYRWFA
RFRLTDKVPD ASTFSQNRRR RFTDTTVYQE IFDEIVRQAI KRGLVDGRVL YTDSTHLKAN
ANKGKFDVVK LEQTPAAYTE ALNAAVDADR AAHGRKPLDR DDDEPPSSKD TKLSRTDPDS
GYMVRDDKPK RFFYLDHRTV DAKHAIITDT HVTPASVHDS QPYLDRLDRQ RERFEFKVEA
VGLDAGYFTP AVCQGLEERG IAGVMGYRTP NHKPGMFYKR QFKYDAYRNE YVCPQGQALP
YSTTNRLGYR EYKSNAQICG RCPVRSQCTN SAIAVKVVTR HVWERAKERV DARRLTEWGQ
RIYARRKQTV ERSFADAKQL HGHRYARMRG LRKVAEQCLL AAAAQNIKKI AMLLARKRKK
GPAGPDWRFV RMLLRLVSGL RCSFDYPLAA NPQS
|
|---|
| |