Gene BMASAVP1_A0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A0232 
Symbol 
ID4678799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp234500 
End bp235600 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content70% 
IMG OID639844510 
Productputative ABC transporter, permease protein 
Protein accessionYP_991583 
Protein GI121598966 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGATCG ACGCCGGCAG CCAAGGCCGC ACCGTGCGCC TCTGCGGCCA GTGGACGGCG 
CTCGCGCTCG CGCGCGACCG CGGCAACGTC GCGCGCCGGA TCGCCCGGCT CGCGAAGGAG
GCGGTCGGCG AGTGGGACCT GTCGGGCGTC GAGCGGCTCG ACCACGTCGG CGGGCAGGCG
CTCTGGCGCG TGTGGGGCCG CAGGCTGCCC GACGGGATCG CGCTCACCGA CAACCAGCGG
GTGGTGTTCA AACGCATCGA ACGGCTCGAC GCGGGCCGCG AGTCGCCCGA GCCCGTCGTG
CGGATCGATC CCGTCACGCG CTTCGGCCAG GGTCTCTTCA CGTTCGGCGA GCACCTGTAC
GGCGGCATCG CGCTGCTCGG CGGCCTGATC GTCGACCTGC TGGCGGTGCT GCGCCGGCCG
CGCACGATGC CGTGGACCGA AATCTCCGCG AACGTCTACG CGGCCGGCAC GAAGGCGCTG
CCGATCACGG CGCTCGTCGC GTTCCTGATC GGCATCGTGC TGTCGTATCT GTCCGCGCAG
CAGTTGCAGC TGTTCGGCGC GAACCGCTAC ATCGTCAACA TCCTCGGCCT GTCCGTGATC
CGCGAGCTCG GGCCGGTGCT GTCGGCGATC CTCGTCGCGG GCCGCTCGGG CTCCGCGATC
ACCGCGCAGA TCGGCGTGAT GCGCGTGACC GAGGAGCTCG ACGCGATGCG CGTGATGGGC
ATTCCGCACG GCCTGCGCAT CACGCTGCCG CGCGTGCTCG CGCTCGGCGT CGCGATGCCG
CTCCTCGTGA TGTGGACCAA CGTGATCGCG CTCACGGGCG GCGCGCTCGC CGCGAAGTTC
GTGCTCGGCA TCGATCTGAA CTTCTTCGTG CGCTCGCTGC CGTCGGTCGT GCCGATCGCG
AACCTGTTCA TCGGGCTCGG CAAGGGCGTC GTGTTCGGGA TGCTGATCGC GCTCGTCGCG
TGCCATTTCG GCTTCCGGAT CAAGGCGAAC TCGCAGAGCC TCGGCGAAGG GACGACGACG
TCCGTCGTCA CGTCGATCAC CGTCGTGATC CTCGCCGACG CGGTGTTCGC GATCCTCTTT
CAGAACGTGG GGCTCGGATG A
 
Protein sequence
MSIDAGSQGR TVRLCGQWTA LALARDRGNV ARRIARLAKE AVGEWDLSGV ERLDHVGGQA 
LWRVWGRRLP DGIALTDNQR VVFKRIERLD AGRESPEPVV RIDPVTRFGQ GLFTFGEHLY
GGIALLGGLI VDLLAVLRRP RTMPWTEISA NVYAAGTKAL PITALVAFLI GIVLSYLSAQ
QLQLFGANRY IVNILGLSVI RELGPVLSAI LVAGRSGSAI TAQIGVMRVT EELDAMRVMG
IPHGLRITLP RVLALGVAMP LLVMWTNVIA LTGGALAAKF VLGIDLNFFV RSLPSVVPIA
NLFIGLGKGV VFGMLIALVA CHFGFRIKAN SQSLGEGTTT SVVTSITVVI LADAVFAILF
QNVGLG