Gene BMASAVP1_A0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A0229 
Symbol 
ID4679147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp232051 
End bp232689 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content75% 
IMG OID639844507 
Productputative lipoprotein 
Protein accessionYP_991580 
Protein GI121598230 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCAC ATTTCATGTC AGGTTCACTG TCCCGCCGCG GCCGTCCGGC GCTCGCGCTC 
GCCGTGGCGC TCGTGATGGC GAGCGCGAGC GGCTGCGCGG GAACGCCCGC CGCGCTCGCG
AACATCCGCT ACGACCTCGG CCCGGCGCAG CCGGCCGCCT CGTCGGGCAC CGAGCCCGCG
CTCAAGGTGC TCGACGTGAG CGCGCCCGAT GCGCTGAACA CCGATCGCTT CGTCTACCGG
CTCGCGTACT CGGACGCGCA GCGGATCGCC GTCTACCGCG ACAGCAAATG GACGGCGCCG
CCCGCGCAAC TGCTGACGCA GCGGCTGCGC GGCGCGCTGT CGGGGCGCGG CGCGGTGCTC
GCGGGCGACG ACGGCGTGCG CGCGCCCGTG CTGAAGGTCG AGCTGTCCGA GTTCGAGCAG
GTGTTCGACG GCCGCTCGGA GAGCCACGCG GCCGTCACCG CGCGCGCGAC GCTCACGCAG
GAGGGCAAGG TGCTCGGCCA GCGCACGTTC GTGTCGCGCG CGCCGGCGAG CACGCCGGAC
GCGGCGGGCG GCGCGCAGGC GCTCGCCACG GCGAGCGACG CGCTCGTCTC GCAGCTCGTC
GCGTGGCTCG GCGTGCAGGC GTACGCGGCC GCGCAATGA
 
Protein sequence
MHAHFMSGSL SRRGRPALAL AVALVMASAS GCAGTPAALA NIRYDLGPAQ PAASSGTEPA 
LKVLDVSAPD ALNTDRFVYR LAYSDAQRIA VYRDSKWTAP PAQLLTQRLR GALSGRGAVL
AGDDGVRAPV LKVELSEFEQ VFDGRSESHA AVTARATLTQ EGKVLGQRTF VSRAPASTPD
AAGGAQALAT ASDALVSQLV AWLGVQAYAA AQ