| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0210 |
|---|
| Symbol | |
|---|
| ID | 4679705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 214558 |
|---|
| End bp | 216684 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639844488 |
|---|
| Product | enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA dehydrogenase |
|---|
| Protein accession | YP_991561 |
|---|
| Protein GI | 121601249 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.384414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGC AGGCTTTCCC CGCAACCGGC ACCGTCACGC GCGAGCGGCG CGACAAGGTG
CTCGTCGTGA CGATCGACCA TCCGCCCGTC AACGCGCTGT CCGCCGACGT GCGGCGCGGC
CTCGTCGACG CGCTCGACGC GGCCGACGCC GACGCCGCCG TCGGCGCGGT GCTGATCGTC
GGCGCCGGTC GCAACTTCAT CGCCGGCGCG GACATCCGCG AGTTCGGCAA GCTGCCCGTG
CCGCCGCTGC TGCCCGACGT ATGCAACCGG ATCGAGACGA GCGGCAAGCC CGTCGTCGTC
GCGTTGCACG GCGCGGCGCT CGGCGGCGGC CTCGAGGTCG CGCTCGCCGC GCATTACCGG
CTCGCGGTGC CGGGCGCGAA GCTCGGCCTG CCCGAAGTGC AGCTCGGTCT GCTGCCCGGC
GCGGGCGGCA CGCAGCGCAC GCCGCGCCTG ATCGGCGCGA AAGCCGCGCT CGAGCTGATG
CTGAGCGGCC GGCACGCGTC GGCCGAGGAG GCGCTGGCGC TTGGCCTCGT CGATCGTCTC
GCGCACAGCG ACGACACGCT CGCCGAAGGG CTCGCGTACG TGCACGAGCT GCTCGCGGCG
GGGGCGGGCG TGCGCCGCAC GCGCGACGCG CAGGGGCTCG CCGATCGCGC GGCGGCCGAA
GCCGCGCTCG ACGCGGCGCG CGCCGACGTC GCGCGGCACT CGCGCGGCCT CTTTTCGCCG
GCGAGGATCG TCGACGCGGT CGCCGCCGCG CTCGCGCAGC CGTTCGACGA AGGCCTGCGC
ACCGAGCGCA GGCTGTTCGT CGAATGCCTC GACAGCCCGC AGCGCGCGGG GCTCGTGCAC
GCGTTCTTCG CGCAGCGCGA GGCGGCGAAG TCGCCGGAGA CGCGCCGCGG CGCGCCGCGC
GCGATCGAGC GGATCGGCGT GGTCGGCGGC GGCACGATGG GCGCGGGCAT CGCGGTCGCG
GCGCTCGACG CGGGGTTTCC CGTCACGATG ATCGAGCGCG ACGACGCGTC GCTCGAACGC
GGCCGCGCGC ACGTCGAGAA GGTCTATGCG GGCCTCGTCG CGAAGGGCCG GATGACGCCG
GCCGCGCAGG CCGCGCGCCT CGCGCGCTTC AAGGGCGGCA CGTCGTACGA GGCGCTCGCG
CAGGCCGACG TCGTGATCGA GGCGGTGTTC GAGGACATGG CGGTGAAGAA GGCCGTGTTC
GCCGAACTCG CGCGCGCGTG CAAGCCCGGC GCGGTGCTCG CGACGAACAC GTCGTATCTC
GATATCGACG AACTCGCCGC GAGCGTCGAG CGCGCGCCGG ACGTGATCGG CCTGCATTTC
TTCTCGCCCG CGAACATCAT GAAGCTGCTC GAAGTGGTCG TGCCGGCGAA GGTGAGCGCG
GACGTCGTCG CGACCGCGTT CGAGCTCGCG AGGAAGCTCG GGAAGATTCC GGTGCGCGCG
GGCGTGTGCG ACGGCTTCAT CGGCAACCGC GTGCTCGCCG TCTACCGCAC GGCCGCCGAT
TACATGATGG AAGACGGCGC CTCGCCGTAT CAGATCGACC GCGCGATCCG CGAATTCGGC
TTCCCGATGG GCCCGTACCA GGTCGTCGAT CTCGCGGGCG GCGACATCGG CTGGGCGACG
CGCAAGCGCC GCGCGCCGAC GCGCGATCCG CGGCTGCGCT ACGTCGAGAT CGGCGATCGC
CTCTGCGAGC GCGGCTGGTT CGGCCAGAAG ACGGGCCGCG GCTACTACCT GTATCCGGAC
GGCGCGCGCG TCGGCACGCC GGATCCGGAA GTCGAGGCGA TCATCGCGCA GGCGCGCGCG
GCGAAGGGCG TGAGCCCGCG TGCGTTCACC GACGAGGAAA TCGTCCGCCG CTATCTCGCC
GCGATGATCA ACGAGGGCGC GAACGTCGTG CACGAGAAGA TCGCGCTGCG CCCGCTCGAC
GTCGACGCGG TGTTCCTGCA CGGCTACGGC TTCCCGCGCC ATCGCGACGG CCCGATGCAT
TACGCGGACA CGGTGGGCCT CGCGAACGTG CTCGCCGACA TCCGCGCGTT CGCGGGCGAG
GACCCCGTCT TCTGGAAGCC GTCGCCGCTG CTCGTCGATC TCGTCGCGCG CGGCGAGACC
TTCGCGAGCC TGAACCGCAT CGACTGA
|
|---|
| Protein sequence | MNQQAFPATG TVTRERRDKV LVVTIDHPPV NALSADVRRG LVDALDAADA DAAVGAVLIV
GAGRNFIAGA DIREFGKLPV PPLLPDVCNR IETSGKPVVV ALHGAALGGG LEVALAAHYR
LAVPGAKLGL PEVQLGLLPG AGGTQRTPRL IGAKAALELM LSGRHASAEE ALALGLVDRL
AHSDDTLAEG LAYVHELLAA GAGVRRTRDA QGLADRAAAE AALDAARADV ARHSRGLFSP
ARIVDAVAAA LAQPFDEGLR TERRLFVECL DSPQRAGLVH AFFAQREAAK SPETRRGAPR
AIERIGVVGG GTMGAGIAVA ALDAGFPVTM IERDDASLER GRAHVEKVYA GLVAKGRMTP
AAQAARLARF KGGTSYEALA QADVVIEAVF EDMAVKKAVF AELARACKPG AVLATNTSYL
DIDELAASVE RAPDVIGLHF FSPANIMKLL EVVVPAKVSA DVVATAFELA RKLGKIPVRA
GVCDGFIGNR VLAVYRTAAD YMMEDGASPY QIDRAIREFG FPMGPYQVVD LAGGDIGWAT
RKRRAPTRDP RLRYVEIGDR LCERGWFGQK TGRGYYLYPD GARVGTPDPE VEAIIAQARA
AKGVSPRAFT DEEIVRRYLA AMINEGANVV HEKIALRPLD VDAVFLHGYG FPRHRDGPMH
YADTVGLANV LADIRAFAGE DPVFWKPSPL LVDLVARGET FASLNRID
|
|---|
| |