Gene BMASAVP1_A0090 details

Gene Information

• Locus tag: BMASAVP1_A0090
• Symbol: pth
• ID: 4679235
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 90102
• End bp: 90707
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639844368
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_991441
• Protein GI: 121601224
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.971877
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAAAC TGATCGTCGG CCTCGGCAAT CCCGGGGCGG AATACACGGC GACGCGCCAC 
AACGCGGGTT TCTGGCTCGT CGACCAGCTC GCGCGCGAAG CCGGCGCGAC GCTGCGCGAC 
GAACGGCGCT TCCACGGCTT CTATGCGAAG GCGCGCCTGT TCGGCGAGGA AGTGCACCTG 
CTCGAGCCGC AGACGTACAT GAATCGCTCC GGCCAAGCGG TCGTCGCGCT CGCGCATTTC 
TTCAAAATCC TGCCGACCGA GATACTCGTC GCGCACGACG AGCTGGACCT GCCGCCCGGC 
GCGGCAAAGC TCAAGCTCGG CAGCGGCAGC GGCGGCCACA ACGGCCTGAA GGACATCTCC 
GCACATCTGT CCTCGCAGCA GTACTGGCGG CTGCGGATCG GCATCGGCCA TCCGCGCGAC 
CTGATTCCCG AAAGCGCGCG CGCGGGCGCG AAGCCCGACG TCGCGAACTT CGTGCTGAAG 
CCGCCGCGCA AGGACGAGCA GGACCTGATC GACGCCGCGA TCGAGCGCGC GCTCGCCGTG 
ATGCCGACCG CCATCAAGGG CGAGACCGAG CGCGCGATGA TGCAGTTGCA TCGCAACGGC 
GCGTAA 

 

Protein sequence

MIKLIVGLGN PGAEYTATRH NAGFWLVDQL AREAGATLRD ERRFHGFYAK ARLFGEEVHL 
LEPQTYMNRS GQAVVALAHF FKILPTEILV AHDELDLPPG AAKLKLGSGS GGHNGLKDIS 
AHLSSQQYWR LRIGIGHPRD LIPESARAGA KPDVANFVLK PPRKDEQDLI DAAIERALAV 
MPTAIKGETE RAMMQLHRNG A