Gene BMASAVP1_A0078 details

Gene Information

• Locus tag: BMASAVP1_A0078
• Symbol: ptsN
• ID: 4681038
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 79050
• End bp: 79568
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639844356
• Product: PTS system, nitrogen regulatory IIA protein
• Protein accession: YP_991430
• Protein GI: 121599600
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACCGACA TGGAAAATCA GTCCGCCGCG AGGAGACCCC AGGCCGCCCC TACGCCTGCC 
AACATGAATC GCCTAGCCAA AATCCTGCCT TTGGAGAACG TCGTCATCGA CCTCTCCGTC 
ACCAGCAAGA AACGCGTCTT CGAACAGGCC GGCCTGATCT TCGAGAATCA GAACGGCATC 
GCGCGCAGCA CCGTCACCGA CAATCTGTTC GCACGCGAAC GTCTCGGTTC GACGGGCCTC 
GGCGAGGGCG TCGCCATTCC GCACGGCCGG ATCAAGGGGC TCAAGCATCC GCTCGCCGCC 
TTCGTGCGGC TCGCCGAGCC GATTCCGTTC GAGGCGCCCG ACGGCCAGCC CGTGTCGCTG 
CTGATCTTCC TGCTCGTGCC CGAGCAGGCG ACGCAGGCGC ACCTCGAAAT CCTTTCCGAA 
ATTGCCCAGC TGCTGTCCGA TCGCGACACG CGCGAGCGTC TGCACACCGA ACCGGACCGC 
GACGAGTTGC ATCGACTCCT GACTCAGTGG CAACCTTAG 

 

Protein sequence

MTDMENQSAA RRPQAAPTPA NMNRLAKILP LENVVIDLSV TSKKRVFEQA GLIFENQNGI 
ARSTVTDNLF ARERLGSTGL GEGVAIPHGR IKGLKHPLAA FVRLAEPIPF EAPDGQPVSL 
LIFLLVPEQA TQAHLEILSE IAQLLSDRDT RERLHTEPDR DELHRLLTQW QP