| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1651 |
|---|
| Symbol | trpA |
|---|
| ID | 4677389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | + |
|---|
| Start bp | 1618351 |
|---|
| End bp | 1619166 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639844166 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_991245 |
|---|
| Protein GI | 121597955 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGTA TTCAGAACAC TTTTGCCGCA CTCGCCGCCC AAGGTCGCAA GGGGCTGATT
CCGTTCATCA CCGCGGGAGA CCCGGACCCG GCGAAGACCG TCGAGCTGAT GCACGCGCTC
GCCGAAGGCG GCGCCGACGT GATCGAGCTC GGCGTGCCGT TCTCCGACCC GATGGCCGAC
GGCCCCGTGA TCCAGCGCTC GTCGGAGCGC GCGCTCGCGA AAGGCGTGAC GCTTCACAGC
GTGCTCGACG ACGTGAAGCG CTTTCGCGCG CGCGACCAGA AGACGCCCGT CGTGCTGATG
GGCTACGCGA ATCCGATCGA GCGCATGGGC GCGGACGCAT TCGCCGCGGC CGCGCGCGAC
GCGGGCGTCG ACGGCGTGCT CGTCGTTGAC TATCCGCCCG AGGAATCGCA CGATTTCGCC
GCGAAGATGC GCGCGGCGGG CATCGATCCG ATCTTCCTGC TCGCGCCGAC GTCGACCGAC
GACCGGATCG CCGCCGTCGG CCAGGTGGCG AGCGGCTACG TCTACTATGT GTCGCTCAAG
GGGGTGACGG GCGCCGCAAA TCTGGATGTT TCCAGCATTG CGGGTAAAAT CCCGGCCATC
AAGTCGCGCG TGCCGCTTCC CGTCGGGGTC GGTTTCGGCA TCCGCGACGC CGCGACGGCG
CGCGCGGTGG CCGAGGTGGC GGACGCCGTC GTGATCGGCA GCCGCCTTGT CCAGCTGCTG
GAGCAGGCCG TGCCGGAGCG GGCCGCCGCC GAGCTCGCGG GGTTCGTCGC CGAGCTGCGC
GCCGCGATCG ACGGCGCGGC GAAGCCGGCG GCATGA
|
|---|
| Protein sequence | MSRIQNTFAA LAAQGRKGLI PFITAGDPDP AKTVELMHAL AEGGADVIEL GVPFSDPMAD
GPVIQRSSER ALAKGVTLHS VLDDVKRFRA RDQKTPVVLM GYANPIERMG ADAFAAAARD
AGVDGVLVVD YPPEESHDFA AKMRAAGIDP IFLLAPTSTD DRIAAVGQVA SGYVYYVSLK
GVTGAANLDV SSIAGKIPAI KSRVPLPVGV GFGIRDAATA RAVAEVADAV VIGSRLVQLL
EQAVPERAAA ELAGFVAELR AAIDGAAKPA A
|
|---|
| |