| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1624 |
|---|
| Symbol | sdhB |
|---|
| ID | 4676837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | + |
|---|
| Start bp | 1592770 |
|---|
| End bp | 1593471 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639844139 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_991218 |
|---|
| Protein GI | 121597902 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.18898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAC GCATTTTCGA AATCTACCGC TACGATCCGG ACAAGGACGC CGCGCCGCGC
ATGCAGACGT ACGAGCTGGA GATCCAGCAC GAGCGGATGC TGCTCGATGC GCTCGTCAAG
CTGAAGTCGG TCGACGAGAC GCTGTCGTTC CGCCGCTCGT GCCGCGAAGG CGTGTGCGGC
TCGGACGCGA TGAACATCAA CGGCAAGAAC GGCCTCGCGT GCCTGACGAA CCTGAACGAC
CTGCCGCAGA AGATCGTGCT GCGTCCGCTG CCGGGCCTGC CTGTCGTGCG CGATCTGATC
TGCGACTTCA CGCAGTTCTT CAACCAGTAC CACTCGATCC GCCCGTACCT GATCAACGAC
GAGCCGCCGC CCGAGAAGGA GCGTCTGCAA TCGCCGGAAG AGCGCGACGA GCTCGACGGC
CTGTACGAGT GCATTCTGTG CGCGAGCTGC TCGACGTCGT GCCCGAGCTT CTGGTGGAAT
CCGGACAAGT TCGTCGGCCC GGCGGGCCTG CTGCAGGCGT ATCGCTTCAT CGCGGACAGC
CGCGATCGCG CGACGGGCGA GCGCCTCGAC AACCTCGACG ATCCGTATCG CCTGTTCCGC
TGCCACACGA TCATGAACTG CGTCGACGTG TGCCCGAAGG GCCTGAACCC GACGAAGGCG
ATCGGCAAGA TCAAGGAATT GATGGTTCGT CGCGCGGTCT GA
|
|---|
| Protein sequence | MAKRIFEIYR YDPDKDAAPR MQTYELEIQH ERMLLDALVK LKSVDETLSF RRSCREGVCG
SDAMNINGKN GLACLTNLND LPQKIVLRPL PGLPVVRDLI CDFTQFFNQY HSIRPYLIND
EPPPEKERLQ SPEERDELDG LYECILCASC STSCPSFWWN PDKFVGPAGL LQAYRFIADS
RDRATGERLD NLDDPYRLFR CHTIMNCVDV CPKGLNPTKA IGKIKELMVR RAV
|
|---|
| |