Gene BMASAVP1_1621 details

Gene Information

• Locus tag: BMASAVP1_1621
• Symbol: sdhC
• ID: 4676873
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 1590179
• End bp: 1590595
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 639844136
• Product: succinate dehydrogenase, cytochrome b556 subunit
• Protein accession: YP_991215
• Protein GI: 121597824
• COG category: [C] Energy production and conversion
• COG ID: [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
• TIGRFAM ID: [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAA CAGTAAGAAA ACCGAGGCCG GAGTACCGGA ACATCGGGTT CGGCGACATC 
ACGCTCAAAT ACCGTATGCC GCTCGCGGCT CGGGTTTCGA TTCTGCACCG GGTCAGCGGC 
GCCCTGCTGT TCCTGTTCCT TCCTTTCCTG CTGTACCTCT TCGACCAGAG CCTCACGTCC 
GAGCTGAGCT TCGAAGTCTT CAAGGCCTTC CTCTCCAACA TCATCGTCAA GCTGATCGTC 
CTCGCGCTGT CGTGGGCGTT CCTGTTCCAC TTCTGCGCCG GCATCCGCCA TCTGATGATG 
GACATGAACC ACGACGCGGT GTCGAAGGAA CGCGGCAAGA AGACGTCGGT CGTCGTGTTC 
GCGGTGTCGA CCCTTCTCAC GATCGCCGTC GCGCTCAAAC TGTTCGGAGC ATTCTAA 

 

Protein sequence

MSETVRKPRP EYRNIGFGDI TLKYRMPLAA RVSILHRVSG ALLFLFLPFL LYLFDQSLTS 
ELSFEVFKAF LSNIIVKLIV LALSWAFLFH FCAGIRHLMM DMNHDAVSKE RGKKTSVVVF 
AVSTLLTIAV ALKLFGAF