Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_1619 |
Symbol | mdh |
ID | 4677038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 1587897 |
End bp | 1588880 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639844134 |
Product | malate dehydrogenase |
Protein accession | YP_991213 |
Protein GI | 121597628 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01759] malate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGC CCGCAAAGCG CGTTGCCGTC ACCGGCGCCG CAGGTCAGAT CGCTTACTCA CTGCTGTTTC GCATCGCGAA CGGCGACCTG CTCGGCAAGG ATCAGCCGGT CATCCTGCAA CTGCTCGACC TCCCGCAAGC CCAGGCCGCC GTCAAAGGCG TCGTGATGGA ACTGGACGAT TGCGCGTTCC CGCTGCTCGC GGGCGTCGTG ATCACCGACG ACCCGAAGGT CGCGTTCAAG GACGCCGACG TCGCGCTGCT GGTGGGCGCG CGTCCGCGCT CGAAGGGCAT GGAGCGCAAG GATCTGCTGT CGGCGAACGC CGAGATCTTC ACGGTCCAGG GCGCGGCGCT GAACGAAGTC GCGAGCCGCG ACGTGAAGGT GCTGGTCGTC GGCAACCCGG CGAACACGAA CGCGTACATC GCGATGAAGT CGGCGCCGGA TCTGCCGAAG AAGAACTTCA CGGCGATGCT GCGCCTCGAC CACAACCGCG CGCTGTCGCA GCTCGCCGCG AAGTCGGGCA AGCCGGTCGC GTCGATCGAG AAGCTCGCCG TGTGGGGCAA CCACTCGCCG ACGATGTACC CCGACTTCCG CTTCGCGACC GCCGAGGGCG AATCGCTGCT GAAGCTGATC AACGACGACG TGTGGAACCG CGACACGTTC ATCCCGACCG TCGGCAAGCG CGGCGCGGCG ATCATCGAAG CGCGCGGCCT GTCGTCGGCG GCGTCGGCGG CCAACGCGGC GATCGACCAC GTGCGTGACT GGGTGCTCGG CACGAACGGC AAGTGGGTCA CGATGGGCAT CCCGTCGGAC GGCTCGTACG GCATCCCCGA GGACATCATC TACGGCGTGC CGGTGATTTG CGAAAACGGC GAGTACAAGC GCGTCGAGGG CCTGGAAATC GACGCGTTCT CGCGCGAGAA GATGGACGGC ACGCTCGCCG AGCTGCTCGA GGAGCGCGAC GGCGTCGCCC ATCTGCTGAA GTAA
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Protein sequence | MAKPAKRVAV TGAAGQIAYS LLFRIANGDL LGKDQPVILQ LLDLPQAQAA VKGVVMELDD CAFPLLAGVV ITDDPKVAFK DADVALLVGA RPRSKGMERK DLLSANAEIF TVQGAALNEV ASRDVKVLVV GNPANTNAYI AMKSAPDLPK KNFTAMLRLD HNRALSQLAA KSGKPVASIE KLAVWGNHSP TMYPDFRFAT AEGESLLKLI NDDVWNRDTF IPTVGKRGAA IIEARGLSSA ASAANAAIDH VRDWVLGTNG KWVTMGIPSD GSYGIPEDII YGVPVICENG EYKRVEGLEI DAFSREKMDG TLAELLEERD GVAHLLK
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