| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1616 |
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| Symbol | prpD |
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| ID | 4677682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | - |
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| Start bp | 1584486 |
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| End bp | 1585994 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639844131 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_991210 |
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| Protein GI | 121597188 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCATGA GACCGGAGCC GGCGCCGCCG CGCCCGAGCC GGTCGACAGG AGCCTCGATG
TCCGCCCCTA TCCCGAACGT CCGGCCAGCG CCGGATTCAG TGCTGGTCGA GATCGCCGAC
TACGCGCTGA ACCATCGCAT CGACAGTGCG CTCGCGCTCG AAACCGCGCG CCACTGCCTG
ATCGATACGC TCGGGTGCGG GCTCGAGGCG CTGTCGTATC CCGCCTGCAC CAAGCTGCTC
GGGCCGATCG TGCCCGGCAC GATCGTGCCG CACGGCGCGA AGGTGCCGGG CACGTCGCTG
CAGCTCGACC CGGTGCAGGC CGCGTTCAAC ATCGGCGCGG CGATCCGCTG GCTCGACTTC
AACGACACGT GGCTCGCGGC CGAATGGGGC CATCCTTCGG ACAACCTGGG CGGCATCCTC
GCGACGGCCG ACTGGCTCTC GCGCACCGCC GTCGCGTCCG GCAAGCGGCC GCTCGCGATG
AAGGACGTGC TCGTCGCGAT GATCCATGCG CATGAGATCC AGGGCTGCCT CGCGCTCGAA
AATTCGTTCA ATGCGGTCGG CCTCGATCAC GTGCTGCTCG TGAAGGTCGC CTCGACCGCG
ACCGTCGGCT GCCTGCTCGG CCTCACGCGC GACGAGCTGA TCAACGCGCT GTCGCTCGCG
TTCGTCGACG GCCAGGCGCT GCGCACCTAT CGCCACGCGC CGAACACCGG CTCGCGCAAG
TCGTGGGCGG CGGGCGACGC GACCTCGCGC GCGGTGCGCC TCGCGCTGAT CGCGAAAACG
GGCGAGATGG GCTACCCGCG CGCGCTCACC GCGAAAACCT GGGGCTTCTA CGACGTGTCG
TTCGGCGGCA AGCCGTTCCG CTTCCAGCGC CCATACGGCA CCTACGTGAT GGAGAACGTG
CTGTTCAAGC TCTCGTATCC GGCCGAATTC CACGCGCAGA CGGCCGTCGA AGCCGCGATG
ACGCTGCACG CGCGGCTCGC GGCGGCCGGG CGCACCGCCG ACGAGATCCG CCGCGTCACC
GTGCGCACGC ATGCGGCCGC GATGCGCATC ATCGACAAGC AAGGGCCGCT CGCGAACCCG
GCCGACCGCG ATCACTGCAT CCAGTACATG ATCGCCGTGC CGCTCCTGTT CGGCCGCCTC
ACGGCCGCCG ACTACGAGGA CGCGGTGGCG GCCGATCCGC GGATCGACGC GCTGCGCGCG
AAGATCGCGT GCGTCGAGGA CCCGCAGTTC ACGCAGGATT ATCACGACCC GGCGAAGCGC
TCGATCGCCA ATGCGCTCAC GATCGAGTTC GACGACGGAT CGACGCTCGC CGAGGTGGCG
GTCGAATACC CGATCGGCCA CATGCGCCGG CGCGCCGAAG GGATGGCGCT CCTGATCGAC
AAGTTCAGGA CGAATCTCGC GCGCCGCTTT CCGGCCAAGC AGCAACAAGC GATTCTCGAC
GTGTCGCTGG ACCAGGCAAA GCTCGAAGCG ATGCCGGTCG ATGAGTACGT CGATCTGTAT
GTGATCTAG
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| Protein sequence | MRMRPEPAPP RPSRSTGASM SAPIPNVRPA PDSVLVEIAD YALNHRIDSA LALETARHCL
IDTLGCGLEA LSYPACTKLL GPIVPGTIVP HGAKVPGTSL QLDPVQAAFN IGAAIRWLDF
NDTWLAAEWG HPSDNLGGIL ATADWLSRTA VASGKRPLAM KDVLVAMIHA HEIQGCLALE
NSFNAVGLDH VLLVKVASTA TVGCLLGLTR DELINALSLA FVDGQALRTY RHAPNTGSRK
SWAAGDATSR AVRLALIAKT GEMGYPRALT AKTWGFYDVS FGGKPFRFQR PYGTYVMENV
LFKLSYPAEF HAQTAVEAAM TLHARLAAAG RTADEIRRVT VRTHAAAMRI IDKQGPLANP
ADRDHCIQYM IAVPLLFGRL TAADYEDAVA ADPRIDALRA KIACVEDPQF TQDYHDPAKR
SIANALTIEF DDGSTLAEVA VEYPIGHMRR RAEGMALLID KFRTNLARRF PAKQQQAILD
VSLDQAKLEA MPVDEYVDLY VI
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